Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_N09
         (211 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   1.2  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   4.9  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    19   6.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   6.4  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    19   6.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   8.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    19   8.5  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 1.2
 Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
 Frame = +2

Query: 11 RCNFFFLQNVMYVHFM---QFFLKCFC 82
          RC FFFL  ++   +       +KC C
Sbjct: 6  RCTFFFLSVILITSYFVTPTMSIKCNC 32


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 25  FFTKCYVCTFHAILSEVFLYR 87
           F+T C V  F  + S   +YR
Sbjct: 470 FYTACVVEAFDYLHSRNIIYR 490


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 84  IQKHFRKNCMKCTYI 40
           I + F+  C KCT I
Sbjct: 67  ITEAFQTQCKKCTEI 81


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 41  MYVHFMQFFLKCFCIEGHNLLILTSYNTYCDS 136
           M V+    +L   CI    LLI+ + +TY ++
Sbjct: 158 MIVYVSLVWLGAACISLPPLLIMGNEHTYSET 189


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 84  IQKHFRKNCMKCTYI 40
           I + F+  C KCT I
Sbjct: 67  ITEAFQTQCKKCTEI 81


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 185 RRN*TLTATDNH*HLT 138
           RR+  LTAT N  HL+
Sbjct: 249 RRSRMLTATVNRNHLS 264


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 4/16 (25%), Positives = 10/16 (62%)
 Frame = +2

Query: 77  FCIEGHNLLILTSYNT 124
           +C+ GHN+ +   + +
Sbjct: 604 YCLFGHNVTLANKFES 619


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,935
Number of Sequences: 438
Number of extensions: 946
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)