Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_N08
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...    40   0.001
X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...    40   0.001
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...    40   0.001
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...    40   0.001
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...    40   0.001
AE013599-658|AAF59084.2|  599|Drosophila melanogaster CG11669-PA...    27   5.7  
AY119031-1|AAM50891.1|  503|Drosophila melanogaster LP05695p pro...    27   10.0 
AE013599-659|AAF59083.2|  588|Drosophila melanogaster CG8690-PA ...    27   10.0 

>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -3

Query: 364 DSEKLKKVISELNGKNVEELIEAGPGKLSSM 272
           D+E+L KVI EL GK++++LI+ G  KLSSM
Sbjct: 35  DAERLTKVIKELAGKSIDDLIKEGREKLSSM 65


>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -3

Query: 364 DSEKLKKVISELNGKNVEELIEAGPGKLSSM 272
           D+E+L KVI EL GK++++LI+ G  KLSSM
Sbjct: 35  DAERLTKVIKELAGKSIDDLIKEGREKLSSM 65


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -3

Query: 364 DSEKLKKVISELNGKNVEELIEAGPGKLSSM 272
           D+E+L KVI EL GK++++LI+ G  KLSSM
Sbjct: 35  DAERLTKVIKELAGKSIDDLIKEGREKLSSM 65


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -3

Query: 364 DSEKLKKVISELNGKNVEELIEAGPGKLSSM 272
           D+E+L KVI EL GK++++LI+ G  KLSSM
Sbjct: 35  DAERLTKVIKELAGKSIDDLIKEGREKLSSM 65


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 18/31 (58%), Positives = 25/31 (80%)
 Frame = -3

Query: 364 DSEKLKKVISELNGKNVEELIEAGPGKLSSM 272
           D+E+L KVI EL GK++++LI+ G  KLSSM
Sbjct: 35  DAERLTKVIKELAGKSIDDLIKEGREKLSSM 65


>AE013599-658|AAF59084.2|  599|Drosophila melanogaster CG11669-PA
           protein.
          Length = 599

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 26  IYFIETYSPSCYSYNINWNKTTSAASTPTLF 118
           +  IETY+P  Y+     N++T+ A  P  F
Sbjct: 306 VLLIETYAPPAYTMQFYGNRSTAGAHLPFNF 336


>AY119031-1|AAM50891.1|  503|Drosophila melanogaster LP05695p
           protein.
          Length = 503

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 26  IYFIETYSPSCYSYNINWNKTTSAASTPTLF 118
           +  IETYSP+ ++     N++T  A  P  F
Sbjct: 216 VLLIETYSPAWFTMQFYGNRSTEGAHLPFNF 246


>AE013599-659|AAF59083.2|  588|Drosophila melanogaster CG8690-PA
           protein.
          Length = 588

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 26  IYFIETYSPSCYSYNINWNKTTSAASTPTLF 118
           +  IETYSP+ ++     N++T  A  P  F
Sbjct: 301 VLLIETYSPAWFTMQFYGNRSTEGAHLPFNF 331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,135,634
Number of Sequences: 53049
Number of extensions: 138871
Number of successful extensions: 443
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)