Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_N08
         (366 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    31   0.25 
AC025716-15|AAO21409.1|  521|Caenorhabditis elegans Udp-glucuron...    28   1.8  
U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AF003151-4|AAK18918.2|  142|Caenorhabditis elegans Hypothetical ...    27   4.1  
AF003151-3|ABJ99067.1|  247|Caenorhabditis elegans Hypothetical ...    27   4.1  
Z68301-8|CAA92626.2|  484|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z68299-1|CAA92609.1|  390|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical ...    26   9.5  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 31.1 bits (67), Expect = 0.25
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = -3

Query: 364 DSEKLKKVISELNGKNVEELIEAGPGKLSSM 272
           D+E  K V+S L GK VEELI  G   L S+
Sbjct: 35  DAETAKLVVSRLAGKTVEELIAEGSAGLVSV 65


>AC025716-15|AAO21409.1|  521|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein31 protein.
          Length = 521

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 53  SCYSYNINWNKTTSAASTPTLFIMKLVKKTEAHVVV 160
           +C+ + I   +TT A  T    I K + KTE HV +
Sbjct: 107 TCFEFFIQMMQTTCAEFTSNREIFKKLSKTEFHVAI 142


>U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical
           protein C31H1.6b protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 62  SYNINWNKTTSAASTPTLFIM 124
           SYNINW K     S PT  I+
Sbjct: 56  SYNINWTKLFQECSEPTYTIL 76


>U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical
           protein C31H1.6a protein.
          Length = 302

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 62  SYNINWNKTTSAASTPTLFIM 124
           SYNINW K     S PT  I+
Sbjct: 75  SYNINWTKLFQECSEPTYTIL 95


>AF003151-4|AAK18918.2|  142|Caenorhabditis elegans Hypothetical
           protein D1007.13a protein.
          Length = 142

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 14  NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 115
           +IP  Y   T++PS Y  + +W  T      PT+
Sbjct: 40  SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 73


>AF003151-3|ABJ99067.1|  247|Caenorhabditis elegans Hypothetical
           protein D1007.13b protein.
          Length = 247

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 14  NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 115
           +IP  Y   T++PS Y  + +W  T      PT+
Sbjct: 145 SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 178


>Z68301-8|CAA92626.2|  484|Caenorhabditis elegans Hypothetical
           protein W01B6.3 protein.
          Length = 484

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 171 ILNRTTTWASVFLTSFIIKRVGVDAAL 91
           +L+R T W SV++ SF++   G+  ++
Sbjct: 15  LLDRKTPWKSVYVVSFLLLLTGLQMSI 41


>Z68299-1|CAA92609.1|  390|Caenorhabditis elegans Hypothetical
           protein T04B2.2 protein.
          Length = 390

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
 Frame = +2

Query: 2   HEVLNIPP----IYFIETYSPSCYSYNINWNKTT 91
           H +LN+ P     YF  T+  S  S  INW+ TT
Sbjct: 70  HFMLNMDPTSNKFYFEHTHQESTISELINWHMTT 103


>AL032657-1|CAA21732.1|  377|Caenorhabditis elegans Hypothetical
           protein Y47H9C.1 protein.
          Length = 377

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 65  YNINWNKTTSAASTPTLFIMKLVKKTEAHVVV 160
           YNIN   TTS  ST T F MK   + ++ +VV
Sbjct: 233 YNINGTNTTSVYST-TGFYMKPAGEDDSTIVV 263


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,695,758
Number of Sequences: 27780
Number of extensions: 71092
Number of successful extensions: 240
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)