Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N06
(256 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 2.4
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 2.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 4.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 20 4.1
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 20 5.5
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 19 7.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 19 7.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 19 7.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 19 7.2
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 19 7.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 7.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 7.2
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.0 bits (42), Expect = 2.4
Identities = 4/15 (26%), Positives = 11/15 (73%)
Frame = +2
Query: 131 VNKNRDYTTKWHWLY 175
+N ++ + +W+W+Y
Sbjct: 617 INPHQQHLDQWNWVY 631
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.0 bits (42), Expect = 2.4
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -2
Query: 138 LLTLSCMYEYISQRWLET 85
++ S +YE + RWL T
Sbjct: 98 VMPFSAIYEVLENRWLFT 115
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 4.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 160 FCCVISIFVNIILY 119
FC VIS+ ++LY
Sbjct: 164 FCAVISMHDGLVLY 177
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 20.2 bits (40), Expect = 4.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 160 FCCVISIFVNIILY 119
FC VIS+ ++LY
Sbjct: 159 FCAVISMHDGLVLY 172
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 19.8 bits (39), Expect = 5.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 82 ACFEPSL 102
ACFEPSL
Sbjct: 171 ACFEPSL 177
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 19.4 bits (38), Expect = 7.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 47 LKSVLVFIYSTVRVSSHRWLIYSYIQDNVNKNR 145
++ VL ++ + +SH W I I DN + R
Sbjct: 1 MQVVLGSLFLLLLSTSHGWQIRDRIGDNELEER 33
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 19.4 bits (38), Expect = 7.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 126 IMLTKIEITQQNGTGYTFKKNLIILSDSLHSVRIL 230
+M + + + YT K + I + + LHS R+L
Sbjct: 10 LMAAIVLVAARPDESYTSKFDNINVDEILHSDRLL 44
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 19.4 bits (38), Expect = 7.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 126 IMLTKIEITQQNGTGYTFKKNLIILSDSLHSVRIL 230
+M + + + YT K + I + + LHS R+L
Sbjct: 10 LMAAIVLVAARPDESYTSKFDNINVDEILHSDRLL 44
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 19.4 bits (38), Expect = 7.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 126 IMLTKIEITQQNGTGYTFKKNLIILSDSLHSVRIL 230
+M + + + YT K + I + + LHS R+L
Sbjct: 10 LMAAIVLVAARPDESYTSKFDNINVDEILHSDRLL 44
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 19.4 bits (38), Expect = 7.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 47 LKSVLVFIYSTVRVSSHRWLIYSYIQDNVNKNR 145
++ VL ++ + +SH W I I DN + R
Sbjct: 1 MQVVLGSLFLLLLSTSHGWQIRDRIGDNELEER 33
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.4 bits (38), Expect = 7.2
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +2
Query: 50 KSVLVFIYSTVRVSSHRWLIYSYIQDN 130
+ V+V + VR++ HR ++ I +N
Sbjct: 217 RQVVVSSVANVRIADHRGVMPPVILEN 243
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.4 bits (38), Expect = 7.2
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +2
Query: 50 KSVLVFIYSTVRVSSHRWLIYSYIQDN 130
+ V+V + VR++ HR ++ I +N
Sbjct: 217 RQVVVSSVANVRIADHRGVMPPVILEN 243
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,128
Number of Sequences: 438
Number of extensions: 1146
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 4511484
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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