Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N05
(277 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 90 2e-19
AL032648-4|CAA21700.1| 257|Caenorhabditis elegans Hypothetical ... 27 1.4
AF016662-3|AAB66057.1| 461|Caenorhabditis elegans Hypothetical ... 27 1.4
Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical pr... 26 4.4
U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical pr... 25 5.8
U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical pr... 25 5.8
AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical ... 25 5.8
Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical pr... 25 7.7
U28943-1|AAA68356.1| 635|Caenorhabditis elegans Hypothetical pr... 25 7.7
AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p... 25 7.7
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 90.2 bits (214), Expect = 2e-19
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +2
Query: 35 RQQYDAGPPESVIPLGHYGWTVQDDLVCKVDIEDVPYFNAPIYLENKEQIGKIDEIFGNL 214
R YD GPPE V+ +G + QDD+VC +PYFNAPIY +NKEQ+GKIDEIFG+
Sbjct: 49 RGGYDQGPPEEVVLVGVFSHQCQDDIVCNNTSGKIPYFNAPIYFKNKEQVGKIDEIFGSP 108
Query: 215 RDYYVSVKLGENIKAKSFK 271
+ SV L + +KA SF+
Sbjct: 109 GENGFSVTLSQGVKASSFE 127
>AL032648-4|CAA21700.1| 257|Caenorhabditis elegans Hypothetical
protein Y54G9A.5 protein.
Length = 257
Score = 27.5 bits (58), Expect = 1.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 146 NKAHLQYPLCKLGRPEPSNHNGRE 75
N+ L + LC L RP+ SNH RE
Sbjct: 150 NRTALAHFLCDLDRPKSSNHYERE 173
>AF016662-3|AAB66057.1| 461|Caenorhabditis elegans Hypothetical
protein C33C12.5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 173 KEQIGKIDEIFGNLRDYYVSVKLGENIKAK 262
K+Q+ K++EI GN+ + S +G N+++K
Sbjct: 184 KQQVAKLNEIRGNIYLFVSSSMVGFNLRSK 213
>Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.10 protein.
Length = 673
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 36 DSNMMLVLQKVLFLSAIMVGRFRTT*FAKWILKMCLIST-LLSILKI 173
D N++++ + A++V F F KW LK+C S L+++L I
Sbjct: 326 DQNLLIIALLSSIVLAVIVHEF----FEKWYLKLCSTSIGLVTVLLI 368
>Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.5 protein.
Length = 673
Score = 25.8 bits (54), Expect = 4.4
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 36 DSNMMLVLQKVLFLSAIMVGRFRTT*FAKWILKMCLIST-LLSILKI 173
D N++++ + A++V F F KW LK+C S L+++L I
Sbjct: 326 DQNLLIIALLSSIVLAVIVHEF----FEKWYLKLCSTSIGLVTVLLI 368
>U88174-4|AAB42275.1| 280|Caenorhabditis elegans Hypothetical
protein M01A10.3 protein.
Length = 280
Score = 25.4 bits (53), Expect = 5.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -1
Query: 223 VIPKIAKNFVNLSDLFLIFKIDRSVEIRHIFNIHFAN 113
V+ AK+F NLS F I + V I++ N FAN
Sbjct: 112 VLRTAAKSFRNLSGQFKISLLVGDVTIKNPINWQFAN 148
>U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical
protein T12A2.5 protein.
Length = 994
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 120 KWILKMCLISTLLSILKIRNKSERLTKFLAIFG 218
KW + L+ +LK E L KFLA G
Sbjct: 421 KWNEATIFVDALVQLLKESRSHENLMKFLAFHG 453
>AL132853-2|CAB60441.2| 424|Caenorhabditis elegans Hypothetical
protein Y80D3A.4 protein.
Length = 424
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 167 ENKEQIGKIDEIFGNLRDYYVSVK 238
EN E+I ++++ NL DYYV+VK
Sbjct: 351 ENCEKI--MEKLANNLHDYYVNVK 372
>Z81056-1|CAB02902.1| 319|Caenorhabditis elegans Hypothetical
protein F09F3.1 protein.
Length = 319
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 90 VGRFRTT*FAKWILKMCLI-STLLSILKI 173
+ RFRTT W + +C+I T L+I I
Sbjct: 129 IKRFRTTSAINWAILICIIFDTALAIFSI 157
>U28943-1|AAA68356.1| 635|Caenorhabditis elegans Hypothetical
protein E04F6.4 protein.
Length = 635
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 122 VDIEDVPYFNAPIYLENKEQIGKID 196
VDI + YF + IY +N+E +ID
Sbjct: 423 VDISVMQYFPSWIYFKNREFFSQID 447
>AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p450
family protein 33C1 protein.
Length = 497
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 104 DDLVCKVDIEDVPYFNAPI 160
D L+ D D+PYFNA I
Sbjct: 342 DRLITTADKNDLPYFNASI 360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,341,996
Number of Sequences: 27780
Number of extensions: 125215
Number of successful extensions: 416
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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