Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N04
(244 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X62285-1|CAA44173.1| 279|Drosophila melanogaster 35 KDa proteas... 27 2.6
X15497-1|CAA33520.1| 279|Drosophila melanogaster protein ( Dros... 27 2.6
AY147241-1|AAN63095.1| 289|Drosophila melanogaster testis-speci... 27 2.6
AY075285-1|AAL68152.1| 289|Drosophila melanogaster AT30494p pro... 27 2.6
AY071178-1|AAL48800.1| 279|Drosophila melanogaster RE23081p pro... 27 2.6
AE014134-2308|AAF53268.1| 289|Drosophila melanogaster CG5648-PA... 27 2.6
AE014134-1781|AAF52875.1| 279|Drosophila melanogaster CG4904-PA... 27 2.6
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 26 8.0
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 26 8.0
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 26 8.0
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 26 8.0
>X62285-1|CAA44173.1| 279|Drosophila melanogaster 35 KDa proteasome
subunit protein.
Length = 279
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 120 LSYXHIYNCTCPIQMLYINRPNKLQ 46
L+Y H Y+ T P+ L N NK+Q
Sbjct: 93 LNYKHSYDTTYPVSRLITNLGNKMQ 117
>X15497-1|CAA33520.1| 279|Drosophila melanogaster protein (
Drosophila melanogastermRNA for 35 kd subunit of
proteasome. ).
Length = 279
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 120 LSYXHIYNCTCPIQMLYINRPNKLQ 46
L+Y H Y+ T P+ L N NK+Q
Sbjct: 93 LNYKHSYDTTYPVSRLITNLGNKMQ 117
>AY147241-1|AAN63095.1| 289|Drosophila melanogaster testis-specific
20S proteasomesubunit alpha 6T protein.
Length = 289
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 120 LSYXHIYNCTCPIQMLYINRPNKLQ 46
++Y H YN P++ L N NKLQ
Sbjct: 93 MAYRHSYNAEFPVRRLVSNLGNKLQ 117
>AY075285-1|AAL68152.1| 289|Drosophila melanogaster AT30494p
protein.
Length = 289
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 120 LSYXHIYNCTCPIQMLYINRPNKLQ 46
++Y H YN P++ L N NKLQ
Sbjct: 93 MAYRHSYNAEFPVRRLVSNLGNKLQ 117
>AY071178-1|AAL48800.1| 279|Drosophila melanogaster RE23081p
protein.
Length = 279
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 120 LSYXHIYNCTCPIQMLYINRPNKLQ 46
L+Y H Y+ T P+ L N NK+Q
Sbjct: 93 LNYKHSYDTTYPVSRLITNLGNKMQ 117
>AE014134-2308|AAF53268.1| 289|Drosophila melanogaster CG5648-PA
protein.
Length = 289
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 120 LSYXHIYNCTCPIQMLYINRPNKLQ 46
++Y H YN P++ L N NKLQ
Sbjct: 93 MAYRHSYNAEFPVRRLVSNLGNKLQ 117
>AE014134-1781|AAF52875.1| 279|Drosophila melanogaster CG4904-PA
protein.
Length = 279
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 120 LSYXHIYNCTCPIQMLYINRPNKLQ 46
L+Y H Y+ T P+ L N NK+Q
Sbjct: 93 LNYKHSYDTTYPVSRLITNLGNKMQ 117
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 240 DMYFDTLNPHMRSVWPGRLRFEYNVASNKCL*HILLIEFYLSYXHIYNCTCPIQMLYINR 61
D + +T+N +R++ L Y+V N C I L E ++ N P + L N+
Sbjct: 332 DYHINTVNSGLRTIKESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQ 391
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 240 DMYFDTLNPHMRSVWPGRLRFEYNVASNKCL*HILLIEFYLSYXHIYNCTCPIQMLYINR 61
D + +T+N +R++ L Y+V N C I L E ++ N P + L N+
Sbjct: 448 DYHINTVNSGLRTIKESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQ 507
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 240 DMYFDTLNPHMRSVWPGRLRFEYNVASNKCL*HILLIEFYLSYXHIYNCTCPIQMLYINR 61
D + +T+N +R++ L Y+V N C I L E ++ N P + L N+
Sbjct: 410 DYHINTVNSGLRTIKESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQ 469
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 25.8 bits (54), Expect = 8.0
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 240 DMYFDTLNPHMRSVWPGRLRFEYNVASNKCL*HILLIEFYLSYXHIYNCTCPIQMLYINR 61
D + +T+N +R++ L Y+V N C I L E ++ N P + L N+
Sbjct: 448 DYHINTVNSGLRTIKESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQ 507
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,954,301
Number of Sequences: 53049
Number of extensions: 155244
Number of successful extensions: 318
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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