Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N03
(350 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 168 2e-43
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 167 4e-43
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 140 8e-35
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 122 1e-29
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 79 3e-16
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 70 9e-14
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 65 3e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 60 1e-10
SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces pom... 27 1.1
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 2.0
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 26 2.0
SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces... 25 3.4
SPAC1783.07c |pap1|caf3, caf3|transcription factor Caf3|Schizosa... 25 4.5
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 24 7.9
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 24 7.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 168 bits (409), Expect = 2e-43
Identities = 83/113 (73%), Positives = 92/113 (81%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSSS QASIEIDSLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA ++
Sbjct: 271 TLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVN 330
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 349
+IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE +L GD S
Sbjct: 331 EIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTS 383
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 167 bits (406), Expect = 4e-43
Identities = 82/113 (72%), Positives = 93/113 (82%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSSS QASIEIDSL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ ++
Sbjct: 271 TLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVN 330
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 349
+IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE IL GD S
Sbjct: 331 EIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTS 383
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 140 bits (338), Expect = 8e-35
Identities = 64/107 (59%), Positives = 83/107 (77%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LSS TQ ++E+DSL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA +HD
Sbjct: 276 LSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHD 335
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 334
IVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE +L
Sbjct: 336 IVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVL 382
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 122 bits (295), Expect = 1e-29
Identities = 58/112 (51%), Positives = 80/112 (71%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSS IEI+S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I
Sbjct: 303 TLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEID 362
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 346
DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE +L G++
Sbjct: 363 DIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEE 413
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 78.6 bits (185), Expect = 3e-16
Identities = 35/94 (37%), Positives = 63/94 (67%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS++++A I+ L +GIDF ITR+ E L D+ + +EP+ K+L+ A + ++I+
Sbjct: 308 LSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINS 367
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 295
I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 368 IILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 70.1 bits (164), Expect = 9e-14
Identities = 32/86 (37%), Positives = 56/86 (65%)
Frame = +2
Query: 83 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 262
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK- 401
Query: 263 KELNKSINPDEXXXXXXXXXXXILHG 340
+E KS+NPDE +L G
Sbjct: 402 REPAKSVNPDEAVAIGAAIQGGVLSG 427
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 64.9 bits (151), Expect = 3e-12
Identities = 33/94 (35%), Positives = 57/94 (60%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS++ A + ++ + ID + I R+ FEEL L P+EK+L A + K ++
Sbjct: 280 LSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYS 339
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 295
I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 340 IEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 60.1 bits (139), Expect = 1e-10
Identities = 28/89 (31%), Positives = 52/89 (58%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS+ T AS +DSL +GIDF++SI R R++ + + V +++ A M+ I +
Sbjct: 298 LSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISE 357
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKS 280
++L GG++ PK+ L++ F + + +S
Sbjct: 358 VILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC926.08c |||Brix doamin protein Rpf2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 1.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 109 QLLKTSTSDRRVEVDTLEE*IDFNAR 32
+LLKT T+ RVE++ + IDFN R
Sbjct: 207 KLLKTKTNLPRVELEEMGPRIDFNIR 232
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 2.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 205 HEYDVVNLGLVHLRIAEGLFDGLHCRSEQISVQLLKTSTSD 83
HEY+V+ L E LF G++ R E + ++L + D
Sbjct: 931 HEYNVIKGLLEEYYNVEKLFSGINKREEDVILRLRDENKDD 971
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 25.8 bits (54), Expect = 2.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 50 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 208
SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 331 SLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPBC36B7.08c |||nucleosome assembly protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 25.0 bits (52), Expect = 3.4
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +3
Query: 126 DLQWSPSKSPSAMRRWTRPRFTTSYSWAG 212
D+ W P KS + P F + W G
Sbjct: 141 DIHWKPGKSLFRKNKKLPPNFFDYFQWTG 169
>SPAC1783.07c |pap1|caf3, caf3|transcription factor
Caf3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 552
Score = 24.6 bits (51), Expect = 4.5
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 8 GTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQI 187
GT S +DSLFE D + + + +LF++ EP E ++ D+ +I
Sbjct: 352 GTDSFPLPTDTGLDSLFEP-DSAIENSHLKNVVMEPELFQAWREPAESLDKEFFNDEGEI 410
Query: 188 HDI 196
D+
Sbjct: 411 DDV 413
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 23.8 bits (49), Expect = 7.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 294 SSGLMDLFSSLPLKKSCRSFC 232
SSGLM F PL+K C C
Sbjct: 6 SSGLMRQFLLQPLRKGCDISC 26
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 23.8 bits (49), Expect = 7.9
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +1
Query: 166 EDGQGPDSRHRTRGRVHSHS*SAEAPARFLQR 261
E+ PD + RGR+HS S + ++ ++R
Sbjct: 622 EEEDVPDHQPSWRGRIHSFSIATDSSQHVVER 653
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,300,442
Number of Sequences: 5004
Number of extensions: 22426
Number of successful extensions: 87
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 106195544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -