Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N03
(350 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 187 2e-48
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 186 3e-48
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 161 1e-40
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 161 1e-40
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 161 2e-40
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 134 2e-32
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 131 2e-31
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 131 2e-31
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 84 3e-17
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 84 3e-17
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 83 5e-17
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 80 5e-16
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 65 1e-11
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 60 6e-10
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 60 6e-10
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 51 3e-07
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 45 2e-05
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 27 2.9
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 27 2.9
AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical... 27 2.9
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z69663-4|CAA93508.1| 287|Caenorhabditis elegans Hypothetical pr... 26 6.6
U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical pr... 26 8.7
AF068721-2|AAC19262.1| 396|Caenorhabditis elegans Hypothetical ... 26 8.7
AF003140-7|AAB54170.2| 333|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 187 bits (456), Expect = 2e-48
Identities = 92/113 (81%), Positives = 98/113 (86%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSSS+QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+H
Sbjct: 274 TLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVH 333
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 349
DIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE IL GDKS
Sbjct: 334 DIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKS 386
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 186 bits (454), Expect = 3e-48
Identities = 92/113 (81%), Positives = 97/113 (85%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSSS QASIEIDSLFEGIDFYT+ITRARFEEL ADLFRSTM+PVEKSLRDAKMDK+Q+H
Sbjct: 274 TLSSSCQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVH 333
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 349
DIVLVGGSTRIPKVQKLL D F+GKELNKSINPDE IL GDKS
Sbjct: 334 DIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKS 386
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 161 bits (391), Expect = 1e-40
Identities = 76/112 (67%), Positives = 91/112 (81%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++I
Sbjct: 274 TLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKID 333
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 346
++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE +L G K
Sbjct: 334 EVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVK 385
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 161 bits (391), Expect = 1e-40
Identities = 76/112 (67%), Positives = 91/112 (81%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSSS++A +E+DSLFEGID T ITRARFEEL ADLFR T+EPVEK+LRDAK+DK++I
Sbjct: 274 TLSSSSEACVEVDSLFEGIDLCTKITRARFEELCADLFRKTLEPVEKALRDAKLDKSKID 333
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 346
++VLVGGSTR+PK+QKLL+DFFNGKELN SINPDE +L G K
Sbjct: 334 EVVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLSGVK 385
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 161 bits (390), Expect = 2e-40
Identities = 75/112 (66%), Positives = 91/112 (81%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLSSST+A++E+DSLF+G DFY+ ITRARFEEL ADLFR T+EPVEK+LRDAK DK +I
Sbjct: 274 TLSSSTEATVEVDSLFDGTDFYSKITRARFEELCADLFRKTLEPVEKALRDAKTDKGRID 333
Query: 191 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 346
++VLVGGSTRIPK+QKLL++FFNGK+LN SINPDE +L G K
Sbjct: 334 EVVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLSGVK 385
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 134 bits (323), Expect = 2e-32
Identities = 61/109 (55%), Positives = 81/109 (74%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS+ Q IEI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L DA M K +H+
Sbjct: 301 LSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKKTDVHE 360
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHG 340
IVLVGGSTRIPKVQ+L++D+FNGKE ++ INPDE ++ G
Sbjct: 361 IVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG 409
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 131 bits (316), Expect = 2e-31
Identities = 58/111 (52%), Positives = 83/111 (74%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K +H+
Sbjct: 304 LSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHE 363
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 346
IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE ++ G++
Sbjct: 364 IVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGEE 414
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 131 bits (316), Expect = 2e-31
Identities = 58/111 (52%), Positives = 83/111 (74%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS+ Q +EI+SLF+G DF ++TRA+FEELN DLFR+T++PV+K L D+ + K +H+
Sbjct: 304 LSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKKDDVHE 363
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDK 346
IVLVGGSTRIPKVQ+L+++FFNGKE ++ INPDE ++ G++
Sbjct: 364 IVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGEE 414
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 83.8 bits (198), Expect = 3e-17
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A + K+QI+
Sbjct: 270 TLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQIN 329
Query: 191 DIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHG 340
+IVLVGGSTRIP ++ ++ Q F + + +SI+PDE +L G
Sbjct: 330 EIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG 380
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 83.8 bits (198), Expect = 3e-17
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 11 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIH 190
TLS+S+ A IE++ L GIDF I+R FE +L +T+ VE+ +R+A + K+QI+
Sbjct: 270 TLSASSVARIELECLHLGIDFIMRISRTDFESWIENLLMATVIHVERVIREANLKKSQIN 329
Query: 191 DIVLVGGSTRIPKVQKLL-QDFFNGKELNKSINPDEXXXXXXXXXXXILHG 340
+IVLVGGSTRIP ++ ++ Q F + + +SI+PDE +L G
Sbjct: 330 EIVLVGGSTRIPILKNIIKQSFESNTRICESIHPDEAVAYGAAIMAAVLSG 380
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 83.0 bits (196), Expect = 5e-17
Identities = 38/87 (43%), Positives = 58/87 (66%)
Frame = +2
Query: 83 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 262
+TRA+FE++ DL + T+EP K+L DA++ +QI D++LVGG +R+PKVQ +Q+ F G
Sbjct: 325 LTRAKFEQIVGDLIKRTIEPCRKALHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-G 383
Query: 263 KELNKSINPDEXXXXXXXXXXXILHGD 343
K +K++NPDE +L GD
Sbjct: 384 KVPSKAVNPDEAVAMGAAIQGAVLAGD 410
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 79.8 bits (188), Expect = 5e-16
Identities = 37/87 (42%), Positives = 56/87 (64%)
Frame = +2
Query: 83 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 262
+TRA+FE++ DL + T+EP L DA++ +QI D++LVGG +R+PKVQ +Q+ F G
Sbjct: 325 LTRAKFEQIVGDLIKRTIEPCRNVLHDAEVKSSQIADVLLVGGMSRMPKVQATVQEIF-G 383
Query: 263 KELNKSINPDEXXXXXXXXXXXILHGD 343
K +K++NPDE +L GD
Sbjct: 384 KVPSKAVNPDEAVAMGAAIQGAVLAGD 410
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 68.1 bits (159), Expect = 2e-12
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS++ + +I+S E ID +TR F L +D+ EP+E++LR A++ I
Sbjct: 309 LSANAEHFAQIESAHEDIDAKLKVTREDFNHLISDMESRFGEPIEQALRMAQIPIDDIDQ 368
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 295
VL+G TR+PKVQ+++Q KE+ K +N DE
Sbjct: 369 FVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDE 402
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 65.3 bits (152), Expect = 1e-11
Identities = 30/70 (42%), Positives = 46/70 (65%)
Frame = +2
Query: 83 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG 262
+TR FE LN DL ++ P+ +L DA +D A + +IVLVGGST++P V+K++ FF
Sbjct: 329 LTRDEFETLNGDLLKAIELPITAALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFFK- 387
Query: 263 KELNKSINPD 292
K N ++P+
Sbjct: 388 KSANYGVDPE 397
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 59.7 bits (138), Expect = 6e-10
Identities = 29/94 (30%), Positives = 53/94 (56%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS++ +++SLFE +F +TR E++ DL P+ ++ A++ I
Sbjct: 296 LSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTNDIDL 355
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 295
+VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 356 VVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 389
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 59.7 bits (138), Expect = 6e-10
Identities = 29/94 (30%), Positives = 53/94 (56%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHD 193
LS++ +++SLFE +F +TR E++ DL P+ ++ A++ I
Sbjct: 312 LSANKDTYAQVESLFEEQNFRAKVTREELEKMIEDLEPRIAAPILDAIGMAQISTNDIDL 371
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 295
+VL+G TR+PKV+++L+ KE++ +N DE
Sbjct: 372 VVLMGAGTRVPKVKEILKTILKDKEISNFLNTDE 405
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 50.8 bits (116), Expect = 3e-07
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Frame = +2
Query: 17 SSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ-IHD 193
++ T + I+ E D + R FE+L A +F + + D K + I +
Sbjct: 281 ANQTPIPLNIECFMEDKDVTGKMQRQEFEDLAAPIFNRIKQVLINLFADGVSIKPEEIDE 340
Query: 194 IVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXIL 334
I +VGGS+RIP ++++++D F GKE ++N DE IL
Sbjct: 341 IEIVGGSSRIPMIREIVKDLF-GKEPKTTMNQDEAVARGAAMQCAIL 386
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 221 IPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHG 340
IPKVQ+L++D+FNGKE ++ INPDE ++ G
Sbjct: 1 IPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGG 40
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 160
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 374 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 423
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 14 LSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPV-EKSLR 160
L +S +EID+ E + Y SIT A+ +N L EPV +K LR
Sbjct: 438 LRNSHPIEVEIDNPNELDEIYDSITYAKSNSVNRMLCYYLSEPVFQKGLR 487
>AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical
protein Y39B6A.25 protein.
Length = 542
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 349 RLVAVQNCSLYGGSVCDGLVRVDGLVQLL 263
+LVA+ N L GG VC G++ D V L+
Sbjct: 373 QLVAISNRRLRGGMVCRGVICEDDTVLLV 401
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -1
Query: 254 RNLAGASAL*ECEWTRPRVRCRESGPCPSSH 162
+N G+ + PR C S PCPSSH
Sbjct: 516 KNPCGSGTMLMTPTNEPRT-CSPSSPCPSSH 545
>Z69663-4|CAA93508.1| 287|Caenorhabditis elegans Hypothetical
protein K02B9.3a protein.
Length = 287
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 273 FSSLPLKKSCRSFCTLGMRVDPPTSTMS*IWAL 175
F PL +C SFC R+ P + S +W L
Sbjct: 233 FVVFPLTTACFSFCVPASRIIPFKESRSEMWKL 265
>U41550-1|AAA83284.1| 1057|Caenorhabditis elegans Hypothetical
protein R04A9.2 protein.
Length = 1057
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 135 WSPSKSPSAMRRWTRPRFTTSYSWAGPL 218
W +K PS+ ++ +P FTT S G L
Sbjct: 35 WGTAKKPSSQQQPPKPLFTTPGSQQGSL 62
>AF068721-2|AAC19262.1| 396|Caenorhabditis elegans Hypothetical
protein ZK1055.4 protein.
Length = 396
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 135 WSPSKSPSAMRRWTRPRFTTSYSWAGPL 218
W S+ + R RP+ T+ Y W PL
Sbjct: 314 WKTSQLQTIPNRKIRPKKTSMYEWFNPL 341
>AF003140-7|AAB54170.2| 333|Caenorhabditis elegans Hypothetical
protein C44E4.2 protein.
Length = 333
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 17 SSSTQASIEIDSLFEGIDFYTSITRARFEEL-NADLFRSTMEPVEKSLRDAKMDKA 181
+SST+ S +I S+ +G +TR F + N DL + + + + K+D +
Sbjct: 115 ASSTKCSEQITSICKGFALEFGLTRRLFSAIWNTDLEETARKMMNQEWDSVKIDSS 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,533,764
Number of Sequences: 27780
Number of extensions: 137152
Number of successful extensions: 422
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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