Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N02
(276 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 146 1e-35
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 145 2e-35
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 145 2e-35
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 145 2e-35
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 145 2e-35
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 145 2e-35
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 145 2e-35
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 145 2e-35
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 145 2e-35
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 145 2e-35
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 132 2e-31
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 102 2e-22
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 100 7e-22
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 95 5e-20
U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow... 31 0.65
M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow... 31 0.65
BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal d... 31 0.65
AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal d... 31 0.65
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 31 0.86
BC005368-1|AAH05368.1| 505|Homo sapiens zinc finger protein 649... 28 4.6
AK022706-1|BAB14191.1| 505|Homo sapiens protein ( Homo sapiens ... 28 4.6
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 146 bits (353), Expect = 1e-35
Identities = 65/84 (77%), Positives = 75/84 (89%), Gaps = 2/84 (2%)
Frame = +1
Query: 31 KMLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVK 204
+MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVK
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 205 EQFAWRHLYWYLTNEGIEYLRIFL 276
EQFAWRH YWYLTNEGI+YLR +L
Sbjct: 69 EQFAWRHFYWYLTNEGIQYLRDYL 92
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 145 bits (352), Expect = 2e-35
Identities = 65/83 (78%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 208 QFAWRHLYWYLTNEGIEYLRIFL 276
QFAWRH YWYLTNEGI+YLR +L
Sbjct: 61 QFAWRHFYWYLTNEGIQYLRDYL 83
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 132 bits (319), Expect = 2e-31
Identities = 59/76 (77%), Positives = 67/76 (88%), Gaps = 2/76 (2%)
Frame = +1
Query: 55 RVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHL 228
R++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRH
Sbjct: 1 RIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHF 60
Query: 229 YWYLTNEGIEYLRIFL 276
YWYLTNEGI+YLR +L
Sbjct: 61 YWYLTNEGIQYLRDYL 76
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 102 bits (244), Expect = 2e-22
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQ 210
MLMP+ +IYE LF+EGVMVAKKD HP + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 211 FAWRHLYWYLTNEGIEYLRIFL 276
FAW H YWYLTNEGI +LR +L
Sbjct: 65 FAWCHFYWYLTNEGIAHLRQYL 86
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 100 bits (240), Expect = 7e-22
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQ 210
MLMP+ +IYE LF+EGVMVAKKD HP + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 211 FAWRHLYWYLTNEGIEYLRIFL 276
FAW H +WYLTNEGI +LR +L
Sbjct: 65 FAWCHFFWYLTNEGIAHLRQYL 86
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 94.7 bits (225), Expect = 5e-20
Identities = 45/60 (75%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 207
MLMPK+N ++IYE LFKEGVMVAKKD H PKHP+L + PNL+V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNWIAIYELLFKEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 174 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 43
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.7 bits (66), Expect = 0.86
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -2
Query: 125 LGAW*SFLATMTPSLKRYS 69
LG W FLAT+TPSLKR S
Sbjct: 177 LGRWTFFLATVTPSLKRSS 195
>BC005368-1|AAH05368.1| 505|Homo sapiens zinc finger protein 649
protein.
Length = 505
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 EGVMVAKKDYHAPKHPDLEKIPN--LQVIKAMQSLKSRGYVKEQFAWRHLYWYLTNEGIE 258
E + + + H+P HP++EK + Q ++ + LK G E Y LTN+
Sbjct: 64 EPLWTLEDEIHSPAHPEIEKADDHLQQPLQNQKILKRTGQRYEHGRTLKSYLGLTNQSRR 123
Query: 259 YLR 267
Y R
Sbjct: 124 YNR 126
>AK022706-1|BAB14191.1| 505|Homo sapiens protein ( Homo sapiens
cDNA FLJ12644 fis, clone NT2RM4001979, weakly similar to
ZINC FINGER PROTEIN 84. ).
Length = 505
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 85 EGVMVAKKDYHAPKHPDLEKIPN--LQVIKAMQSLKSRGYVKEQFAWRHLYWYLTNEGIE 258
E + + + H+P HP++EK + Q ++ + LK G E Y LTN+
Sbjct: 64 EPLWTLEDEIHSPAHPEIEKADDHLQQPLQNQKILKRTGQRYEHGRTLKSYLGLTNQSRR 123
Query: 259 YLR 267
Y R
Sbjct: 124 YNR 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,584,181
Number of Sequences: 237096
Number of extensions: 726601
Number of successful extensions: 1360
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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