Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N02
(276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003151-12|AAK18912.1| 149|Caenorhabditis elegans Ribosomal pr... 111 5e-26
Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical pr... 29 0.62
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 1.9
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 27 1.9
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 27 1.9
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 1.9
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 27 1.9
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 27 1.9
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 27 1.9
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 27 1.9
Z68749-4|CAA92959.2| 179|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 27 2.5
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 27 2.5
U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical pr... 26 3.3
U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical pr... 26 3.3
Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical pr... 26 4.4
U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical pr... 26 4.4
U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical pr... 26 4.4
U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical pr... 26 4.4
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 26 4.4
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 26 4.4
U42836-2|ABC48244.1| 278|Caenorhabditis elegans Hypothetical pr... 25 5.8
U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical pr... 25 5.8
Z83103-3|CAB05473.1| 376|Caenorhabditis elegans Hypothetical pr... 25 7.7
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 25 7.7
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 25 7.7
AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde dehy... 25 7.7
AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde dehy... 25 7.7
AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical ... 25 7.7
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 25 7.7
>AF003151-12|AAK18912.1| 149|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 10 protein.
Length = 149
Score = 111 bits (268), Expect = 5e-26
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
M +PK + IYEYLF EGV VAKKD++A HP++E + NL+VIK ++SL SR VKEQF
Sbjct: 1 MFIPKSHTKLIYEYLFNEGVTVAKKDFNAKTHPNIEGVSNLEVIKTLKSLASRELVKEQF 60
Query: 214 AWRHLYWYLTNEGIEYLRIFL 276
AWRH YWYLT+ GI YLR +L
Sbjct: 61 AWRHYYWYLTDAGILYLREYL 81
>Z50863-3|CAA90735.1| 830|Caenorhabditis elegans Hypothetical
protein C14H10.3 protein.
Length = 830
Score = 28.7 bits (61), Expect = 0.62
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 135 IWMFGCMVVFLSYHDSLLEEVLIDRNTVLFWHQHLGQPTFH 13
+W F C+ V +S + +L+ R F+ QH+ +P H
Sbjct: 10 LWAFACLSVSISRRSEKGKCMLVPRERRHFFVQHVSRPHIH 50
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 534 WSDGCRHCFCENKQEFCSLISCPTKPS 560
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 534 WSDGCRHCFCENKQEFCSLISCPTKPS 560
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.1 bits (57), Expect = 1.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 14 WKVGCPRC*CQNKTVFLSMSTSSRRES 94
W GC C C+NK F S+ + + S
Sbjct: 468 WSDGCRHCFCENKQEFCSLISCPTKPS 494
>Z68749-4|CAA92959.2| 179|Caenorhabditis elegans Hypothetical
protein F56H11.2 protein.
Length = 179
Score = 26.6 bits (56), Expect = 2.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 144 LLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFWHQHLGQP 22
L+ + +FG ++ F++Y+ S + +DR TV H+ P
Sbjct: 65 LVGVMIFGAVINFVNYYKSKKRQKELDRMTVESLLAHMALP 105
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical
protein ZK512.3 protein.
Length = 1418
Score = 26.6 bits (56), Expect = 2.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -2
Query: 206 SLTYPLDLSDCIALITWRLGIFSRSG 129
S YPL L+DC LIT +L + S SG
Sbjct: 293 SQLYPLGLADCYTLIT-KLLVSSNSG 317
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 26.6 bits (56), Expect = 2.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 61 KHGFVLASTSWTTNFP 14
+HG + AST WT N P
Sbjct: 79 QHGLLCASTDWTMNLP 94
>U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical
protein F20D12.1b protein.
Length = 867
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 91 VMVAKKDYHAPKHPDL-EKIPNLQ 159
+ V+ DY+APK P+ +K PNL+
Sbjct: 285 ITVSDVDYNAPKDPEFRQKYPNLK 308
>U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical
protein F20D12.1a protein.
Length = 1030
Score = 26.2 bits (55), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = +1
Query: 91 VMVAKKDYHAPKHPDL-EKIPNLQ 159
+ V+ DY+APK P+ +K PNL+
Sbjct: 448 ITVSDVDYNAPKDPEFRQKYPNLK 471
>Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical
protein C03D6.5 protein.
Length = 245
Score = 25.8 bits (54), Expect = 4.4
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 124 KHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHLYWYLTNE 249
+HPD+ KIP ++ L Y ++F ++ W++ NE
Sbjct: 78 EHPDISKIPVEDIVGVSVLLLRCKYNDQEFI--NMGWFVANE 117
>U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical
protein C41G11.4b protein.
Length = 514
Score = 25.8 bits (54), Expect = 4.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 196 YVKEQFAWRHLYWY 237
Y QFAW H YW+
Sbjct: 77 YAPTQFAWIHSYWW 90
>U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical
protein C41G11.4a protein.
Length = 493
Score = 25.8 bits (54), Expect = 4.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 196 YVKEQFAWRHLYWY 237
Y QFAW H YW+
Sbjct: 77 YAPTQFAWIHSYWW 90
>U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical
protein C41G11.4c protein.
Length = 557
Score = 25.8 bits (54), Expect = 4.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 196 YVKEQFAWRHLYWY 237
Y QFAW H YW+
Sbjct: 77 YAPTQFAWIHSYWW 90
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 10 LVESWLSKMLMPKQNRVSIYEYLFKEGVMVAKK 108
LVE S +L +Q +++ +LF + +M+ KK
Sbjct: 405 LVERRSSNILQSRQKARTLHVFLFSDMIMITKK 437
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 25.8 bits (54), Expect = 4.4
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 10 LVESWLSKMLMPKQNRVSIYEYLFKEGVMVAKK 108
LVE S +L +Q +++ +LF + +M+ KK
Sbjct: 893 LVERRSSNILQSRQKARTLHVFLFSDMIMITKK 925
>U42836-2|ABC48244.1| 278|Caenorhabditis elegans Hypothetical
protein T21F2.1b protein.
Length = 278
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/15 (66%), Positives = 13/15 (86%), Gaps = 1/15 (6%)
Frame = -1
Query: 141 LEIWMFGCM-VVFLS 100
L+IWMFGC+ +FLS
Sbjct: 138 LDIWMFGCVGFIFLS 152
>U42836-1|ABC48243.1| 497|Caenorhabditis elegans Hypothetical
protein T21F2.1a protein.
Length = 497
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/15 (66%), Positives = 13/15 (86%), Gaps = 1/15 (6%)
Frame = -1
Query: 141 LEIWMFGCM-VVFLS 100
L+IWMFGC+ +FLS
Sbjct: 357 LDIWMFGCVGFIFLS 371
>Z83103-3|CAB05473.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.3 protein.
Length = 376
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 43 PKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKI 147
PK+N + EY K G KK+ H DL+ +
Sbjct: 97 PKENNILRTEYTEKAGEYPVKKEIDRIVHGDLDLV 131
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 153 VRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFWH 40
VRD +E+ F V ++ ++ E +L RNTVL +H
Sbjct: 660 VRDSMELLGFYNTVPRTQFYPNVQEALLSARNTVLPFH 697
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 153 VRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFWH 40
VRD +E+ F V ++ ++ E +L RNTVL +H
Sbjct: 660 VRDSMELLGFYNTVPRTQFYPNVQEALLSARNTVLPFH 697
>AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform b protein.
Length = 512
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 144 LLEIWMFGCMVVFLSYHDSLLEEVL 70
LL MFG +V L Y DS ++EVL
Sbjct: 443 LLTEEMFGPVVTVLVYEDSKVDEVL 467
>AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform a protein.
Length = 563
Score = 25.0 bits (52), Expect = 7.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 144 LLEIWMFGCMVVFLSYHDSLLEEVL 70
LL MFG +V L Y DS ++EVL
Sbjct: 443 LLTEEMFGPVVTVLVYEDSKVDEVL 467
>AF016418-2|AAK18901.1| 893|Caenorhabditis elegans Hypothetical
protein C49G7.7 protein.
Length = 893
Score = 25.0 bits (52), Expect = 7.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 31 KMLMPKQNRVSIYEYLFKEGVMVAKKDYH 117
K L+P+ I E L KEG + K YH
Sbjct: 166 KSLLPQNRSPKISENLKKEGYSIPKIAYH 194
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 153 VRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFWH 40
VRD +E+ F V ++ ++ E +L RNTVL +H
Sbjct: 660 VRDSMELLGFYNTVPRTQFYPNVQEALLSARNTVLPFH 697
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,250,942
Number of Sequences: 27780
Number of extensions: 111851
Number of successful extensions: 336
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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