Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N02
(276 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 0.40
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 0.70
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 0.70
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 0.70
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 1.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 22 1.6
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 22 1.6
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 20 6.5
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 20 6.5
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 20 6.5
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 19 8.6
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 19 8.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 19 8.6
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 19 8.6
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 19 8.6
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.8 bits (49), Expect = 0.40
Identities = 10/25 (40%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -1
Query: 141 LEIWMFGCMV-VFLSYHDSLLEEVL 70
L++WM GCM+ VF + + ++ +VL
Sbjct: 262 LDVWMAGCMMFVFAALGEFVVVKVL 286
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 0.70
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 36 VDAKTKPCFYL*VPLQG 86
+DA TKPC + P QG
Sbjct: 294 IDANTKPCTWAARPWQG 310
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 0.70
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 36 VDAKTKPCFYL*VPLQG 86
+DA TKPC + P QG
Sbjct: 294 IDANTKPCTWAARPWQG 310
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.0 bits (47), Expect = 0.70
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 36 VDAKTKPCFYL*VPLQG 86
+DA TKPC + P QG
Sbjct: 294 IDANTKPCTWAARPWQG 310
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 1.2
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1
Query: 106 KDYHAPKHPDLEKI--PNLQVIKAMQSLKSRGYVKEQ 210
KD P + KI PN+ +IK L G V E+
Sbjct: 242 KDAKVPIIVAINKIDKPNIDIIKVQYELAKHGIVIEE 278
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 1.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 12 SGKLVVQDVDAKTKPCFY 65
SG+++++ V K K C+Y
Sbjct: 373 SGRVLMRTVRGKEKTCYY 390
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.8 bits (44), Expect = 1.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 12 SGKLVVQDVDAKTKPCFY 65
SG+++++ V K K C+Y
Sbjct: 373 SGRVLMRTVRGKEKTCYY 390
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.8 bits (39), Expect = 6.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 153 VRDLLEIWMFG 121
V DLL W+FG
Sbjct: 84 VNDLLGYWVFG 94
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.8 bits (39), Expect = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 275 RKILRYSIPSFVKYQ 231
RKIL Y++ + KYQ
Sbjct: 386 RKILGYNLEAASKYQ 400
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 19.8 bits (39), Expect = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 275 RKILRYSIPSFVKYQ 231
RKIL Y++ + KYQ
Sbjct: 386 RKILGYNLEAASKYQ 400
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 19.4 bits (38), Expect = 8.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 275 RKILRYSIPSFVKYQ 231
RK+L + S VKYQ
Sbjct: 385 RKVLGFGYESNVKYQ 399
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 19.4 bits (38), Expect = 8.6
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +1
Query: 202 KEQFAWRH 225
K+Q+ WRH
Sbjct: 385 KKQYTWRH 392
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 19.4 bits (38), Expect = 8.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 275 RKILRYSIPSFVKYQ 231
RK+L + S VKYQ
Sbjct: 385 RKVLGFGYESNVKYQ 399
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 19.4 bits (38), Expect = 8.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 275 RKILRYSIPSFVKYQ 231
RK+L + S VKYQ
Sbjct: 11 RKVLGFGYESNVKYQ 25
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 19.4 bits (38), Expect = 8.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDY 114
+L+P +N S Y K+G + K +
Sbjct: 3 ILIPHRNPASANYYENKDGARIVKASH 29
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,104
Number of Sequences: 438
Number of extensions: 1309
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5388717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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