Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_N01
(353 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 171 4e-44
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 171 4e-44
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 31 0.069
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 0.64
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 1.1
SPAC19D5.02c |||peroxisomal membrane protein Pex22 |Schizosaccha... 26 2.0
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 25 4.5
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 25 4.5
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 4.5
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 24 6.0
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 24 6.0
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 24 6.0
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 24 6.0
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 171 bits (415), Expect = 4e-44
Identities = 79/114 (69%), Positives = 93/114 (81%)
Frame = +2
Query: 11 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 190
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 191 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDARPFRQWYE 352
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYE 114
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 171 bits (415), Expect = 4e-44
Identities = 79/114 (69%), Positives = 93/114 (81%)
Frame = +2
Query: 11 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 190
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 191 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDARPFRQWYE 352
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYE 114
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 30.7 bits (66), Expect = 0.069
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 23 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 196
RD +K + G K+ + EL +N + Q+ L+ S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 197 GNFAWGSECSTRKTRI 244
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 0.64
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 113 WQPGDLTHTSSSYEWAHVC 57
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.6 bits (56), Expect = 1.1
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +2
Query: 26 DHWHKRRATGGKRAPIRKKRKY---ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 196
D W +A G +PIR+ ++Y +L P K H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKF-RDNYHKQNKRNREAKERGIGIKV 816
Query: 197 GNFAWGSECSTRKTRIIDVVYNASNN 274
N S RK R + A NN
Sbjct: 817 -NSELKSAVEIRKARELKEKRLAKNN 841
>SPAC19D5.02c |||peroxisomal membrane protein Pex22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 223
Score = 25.8 bits (54), Expect = 2.0
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -2
Query: 349 IPLPERSGIHHDNSILYQGLGTHQFIVRGIINNINNTSLAG*TFRSPCEVSSIKT 185
I +PE + D+ I + L F+ G+ + NT LAG S ++ IKT
Sbjct: 40 IDIPEMTFRPSDSQIDWSNLSHSDFVQCGVYEDSTNTWLAG---ASKYKIDEIKT 91
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 24.6 bits (51), Expect = 4.5
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +2
Query: 104 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 283
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 284 RTKTLVKNAIVVVDARPFRQWYE 352
+ ++ V PF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 24.6 bits (51), Expect = 4.5
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -3
Query: 165 LPPRDLTKWMRWG-PSL 118
L P+D+ KW RW PSL
Sbjct: 32 LSPQDILKWCRWTLPSL 48
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.6 bits (51), Expect = 4.5
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 26 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 205
+ W K T K+ +KRK L R A +L + + + S+GG +A + ++
Sbjct: 32 EKWSKGVKTN-KKEQEAEKRKAALERKAERERLEKEEMESLPSKGGKGSKKAAKKNSSLD 90
Query: 206 AWGSE 220
A+ +E
Sbjct: 91 AFLNE 95
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 24.2 bits (50), Expect = 6.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 270 LEAL*TTSIIRVLRVEHSDPHAKFPVSRR 184
LE + T S +V R H DP K P RR
Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 24.2 bits (50), Expect = 6.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 316 DNSILYQGLGTHQFIVRGIINNI 248
+NS+ +Q +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 24.2 bits (50), Expect = 6.0
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -3
Query: 207 AKFPVSRRRA-RYLVLPPRDLTKW 139
AK P+ +RR + L+L RDLT W
Sbjct: 420 AKKPILKRRTPQELLLSGRDLTPW 443
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 24.2 bits (50), Expect = 6.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 211 PCEVSSIKTQGTIFSVTTTGSD 146
P V+SIK GT FS G+D
Sbjct: 768 PTAVASIKVSGTEFSTLLHGND 789
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,593,004
Number of Sequences: 5004
Number of extensions: 31526
Number of successful extensions: 75
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 105935336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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