Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_N01
         (353 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...   231   2e-63
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   2.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   2.5  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   4.3  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   5.7  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   5.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    20   7.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    20   7.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   9.9  

>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score =  231 bits (564), Expect = 2e-63
 Identities = 104/114 (91%), Positives = 109/114 (95%)
 Frame = +2

Query: 11  MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 190
           MGISRDHWHKRRATGGKR PIRKKRK+ELGRPAANTKLGPQRIH VR+RGGN KYRALRL
Sbjct: 1   MGISRDHWHKRRATGGKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRL 60

Query: 191 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDARPFRQWYE 352
           DTGNF+WGSEC+TRKTRIIDVVYNASNNELVRTKTLVKNAIV +DA PFRQWYE
Sbjct: 61  DTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQWYE 114


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 262 IINNINNTSLAG 227
           +INN NNTS+ G
Sbjct: 488 VINNRNNTSMKG 499


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 242 YESCGLNIQIPMRSFQYQD 186
           YE CGL  + PM SFQ  D
Sbjct: 653 YE-CGLRFEDPMISFQPGD 670


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 334 RSGIHHDNSILYQGLGTHQFIVRGI 260
           +SG+H   S+  + +GT Q I+  I
Sbjct: 23  KSGLHTVQSVCMKEIGTAQQIIDDI 47


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 6/20 (30%), Positives = 11/20 (55%)
 Frame = +3

Query: 240 VLLMLFIMPLTMNWCVPRPW 299
           +L+   +MPL + W +   W
Sbjct: 85  LLVTFLMMPLEIGWAITVSW 104


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 225 QPARLVLLMLFIMPLTMNW 281
           QP  L+ L+   MPL  NW
Sbjct: 491 QPEPLIELIEHWMPLLPNW 509


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 240 VLLMLFIMPLTMNWCVPRPW*RMLLSWWMPDL 335
           VL + F  P T N     PW R +   WMP L
Sbjct: 333 VLNVHFRSPSTHNMS---PWVRQVFLNWMPRL 361


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +2

Query: 32  WHKRRATGGKRAP 70
           WH  +   GKR P
Sbjct: 148 WHPGKIVNGKRVP 160


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = +2

Query: 32  WHKRRATGGKRAP 70
           WH  +   GKR P
Sbjct: 148 WHPGKIVNGKRVP 160


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 195 VSRRRARYLVLPPRDLTKWMR 133
           + RR +RY + PP+++    R
Sbjct: 116 IIRRNSRYPLRPPQEVISHYR 136


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,588
Number of Sequences: 438
Number of extensions: 2291
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)