Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M24
         (200 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    26   0.14 
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   1.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    22   2.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    22   3.0  
AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450 CY...    21   5.3  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    20   9.3  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 21  RGRRRNVAQGAGSGKTGTAYNIY 89
           R RR  + +G G  +TGT+Y  Y
Sbjct: 551 RSRRTQLGRGFGQERTGTSYPFY 573


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
          protein.
          Length = 814

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 6  QEFGTRGRRRNVAQGAGSGKTG 71
          ++ G  GRRR+      SG+TG
Sbjct: 8  EQLGPDGRRRSSVYTTSSGETG 29


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 27  RRRNVAQGAGSGKTGTAYNIY 89
           R R    G G  +TGT+Y  Y
Sbjct: 551 RSRRTQLGFGQERTGTSYPFY 571


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 18   TRGRRRNVAQGAGSGKTGT 74
            +R R R+ +Q AGS K+G+
Sbjct: 1128 SRSRSRSRSQSAGSRKSGS 1146


>AY062201-1|AAL58562.1|  151|Anopheles gambiae cytochrome P450
           CYP4D22 protein.
          Length = 151

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 36  NVAQGAGSGKTGTAYNIYIIHLH 104
           NV  G      G+ +NI I+H+H
Sbjct: 85  NVELGGKIVPEGSNFNIGIMHMH 107


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -1

Query: 140 PIHNKYI 120
           P+HNKYI
Sbjct: 137 PVHNKYI 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,329
Number of Sequences: 2352
Number of extensions: 3059
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 44
effective length of database: 460,491
effective search space used: 10130802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)