Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M24
         (200 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   1.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    19   7.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   7.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          18   9.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      18   9.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        18   9.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        18   9.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        18   9.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    18   9.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 81  NIYIIHLHYSSSVNIFIVYWG 143
           N YI  L+YS+ VN+   Y G
Sbjct: 126 NDYINRLNYSAFVNLTAYYDG 146


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 77  CSAGFTTTSALGDISTA 27
           C AGF     LGD + A
Sbjct: 211 CGAGFIDGLGLGDNTKA 227


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 66  TGTAYNIYIIHLHYSSS 116
           +GT +++  IHL + +S
Sbjct: 170 SGTVFDLINIHLFHDAS 186


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 63  KTGTAYNIYIIHLHYS 110
           KT   Y  YII  +YS
Sbjct: 191 KTSGKYKEYIIPANYS 206


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 63  KTGTAYNIYIIHLHYS 110
           KT   Y  YII  +YS
Sbjct: 191 KTSGKYKEYIIPANYS 206


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 39  VAQGAGSGKTGTAYNIYIIHLHYSSSVN 122
           +A+  GSG T       +  +  SSS+N
Sbjct: 458 IAESYGSGSTNFNERPAVAVVSKSSSIN 485


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 39  VAQGAGSGKTGTAYNIYIIHLHYSSSVN 122
           +A+  GSG T       +  +  SSS+N
Sbjct: 458 IAESYGSGSTNFNERPAVAVVSKSSSIN 485


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 39  VAQGAGSGKTGTAYNIYIIHLHYSSSVN 122
           +A+  GSG T       +  +  SSS+N
Sbjct: 458 IAESYGSGSTNFNERPAVAVVSKSSSIN 485


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 21   RGRRRNVAQGAGSGKTGTAYNIYIIH 98
            R ++RNV   + SG+  T  + +  H
Sbjct: 1655 RTQQRNVISDSESGRLDTEMSTWGYH 1680


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,523
Number of Sequences: 438
Number of extensions: 909
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  2659293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)