Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M23
(346 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 93 3e-19
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 93 3e-19
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 93 3e-19
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 93 3e-19
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 93 3e-19
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 92 4e-19
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 86 3e-17
X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein pro... 31 0.97
BX641069-1|CAE46034.1| 253|Homo sapiens hypothetical protein pr... 29 5.2
BC002472-1|AAH02472.2| 544|Homo sapiens acyltransferase like 1 ... 29 5.2
AK000488-1|BAA91199.1| 427|Homo sapiens protein ( Homo sapiens ... 29 5.2
AB244718-1|BAF47696.1| 544|Homo sapiens lyso-PAF acetyltransfer... 29 5.2
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
MAS +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+W GLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 249 TNIGSG 266
N+G+G
Sbjct: 61 CNVGAG 66
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
MAS +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+W GLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 249 TNIGSG 266
N+G+G
Sbjct: 61 CNVGAG 66
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
MAS +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+W GLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 249 TNIGSG 266
N+G+G
Sbjct: 61 CNVGAG 66
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
MAS +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+W GLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 249 TNIGSG 266
N+G+G
Sbjct: 61 CNVGAG 66
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
MAS +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+W GLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 249 TNIGSG 266
N+G+G
Sbjct: 61 CNVGAG 66
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 92.3 bits (219), Expect = 4e-19
Identities = 40/66 (60%), Positives = 54/66 (81%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
MAS +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+W GLFAKAL +N+ LI
Sbjct: 1 MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 249 TNIGSG 266
N+G+G
Sbjct: 61 CNVGAG 66
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 85.8 bits (203), Expect = 3e-17
Identities = 39/66 (59%), Positives = 53/66 (80%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
MAS +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+W GLFAKAL +N+ LI
Sbjct: 1 MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60
Query: 249 TNIGSG 266
++G+G
Sbjct: 61 CDVGAG 66
>X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein
protein.
Length = 1754
Score = 31.1 bits (67), Expect = 0.97
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 252 WLLNHEH*CPPRPLQIDQTSTAQHLQQPL 166
WLLN E C PLQID Q QPL
Sbjct: 365 WLLNKELGCINSPLQIDDDFRGQDFNQPL 393
>BX641069-1|CAE46034.1| 253|Homo sapiens hypothetical protein
protein.
Length = 253
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 84 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINV 236
E+ V L VD+D +T E+ STIL+A+ + SGLF + +G ++
Sbjct: 140 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 190
>BC002472-1|AAH02472.2| 544|Homo sapiens acyltransferase like 1
protein.
Length = 544
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 84 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINV 236
E+ V L VD+D +T E+ STIL+A+ + SGLF + +G ++
Sbjct: 431 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 481
>AK000488-1|BAA91199.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ20481 fis, clone KAT07534. ).
Length = 427
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 84 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINV 236
E+ V L VD+D +T E+ STIL+A+ + SGLF + +G ++
Sbjct: 314 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 364
>AB244718-1|BAF47696.1| 544|Homo sapiens lyso-PAF
acetyltransferase:LPC acyltransferase 1 protein.
Length = 544
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 84 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINV 236
E+ V L VD+D +T E+ STIL+A+ + SGLF + +G ++
Sbjct: 431 EIIQVAFKLFDVDEDGYITEEEFSTILQASLGVPDLDVSGLFKEIAQGDSI 481
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,069,482
Number of Sequences: 237096
Number of extensions: 775059
Number of successful extensions: 1014
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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