Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M23
(346 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 125 2e-29
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 125 2e-29
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 125 2e-29
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 118 2e-27
AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p pro... 29 2.1
AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA... 29 2.1
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 28 2.8
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 28 3.7
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 27 6.5
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 27 6.5
X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein p... 27 8.7
BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p pro... 27 8.7
AL009195-2|CAA15706.1| 1192|Drosophila melanogaster EG:30B8.2,FB... 27 8.7
AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein... 27 8.7
AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA ... 27 8.7
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 125 bits (301), Expect = 2e-29
Identities = 59/68 (86%), Positives = 66/68 (97%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYW GLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 249 TNIGSGVG 272
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 125 bits (301), Expect = 2e-29
Identities = 59/68 (86%), Positives = 66/68 (97%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYW GLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 249 TNIGSGVG 272
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 125 bits (301), Expect = 2e-29
Identities = 59/68 (86%), Positives = 66/68 (97%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
M++KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYW GLFAKALEGINV+DLI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 249 TNIGSGVG 272
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 118 bits (285), Expect = 2e-27
Identities = 57/68 (83%), Positives = 64/68 (94%)
Frame = +3
Query: 69 MASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFAKALEGINVRDLI 248
M++KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYW GLFAKALE INV+DLI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 249 TNIGSGVG 272
TNIGSGVG
Sbjct: 61 TNIGSGVG 68
>AY061562-1|AAL29110.1| 249|Drosophila melanogaster LP11415p
protein.
Length = 249
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 36 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 161
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AE014298-1718|AAF48118.1| 249|Drosophila melanogaster CG2471-PA
protein.
Length = 249
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +3
Query: 36 AFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTI 161
+F L ++ FK+ S A L +A++ +D D A+T + ++ +
Sbjct: 174 SFIVLPQVVFKLQSLASLDAQNNAILEIDTDEAITSDNLALV 215
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 250 VIKSRTLMPSKAFANRPDQYGSTSTAAAFSMVEI 149
+I S+ L+P+K N P QY T+ A +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 241 SRTLMPSKAFANRPDQYGSTSTAAAFSMVEIFSPVTATSSSTR 113
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 241 SRTLMPSKAFANRPDQYGSTSTAAAFSMVEIFSPVTATSSSTR 113
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 410 SQNFIPAKTHINIPTQYNDTNATKALKTAKAASPSHTYSRQTK 452
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 241 SRTLMPSKAFANRPDQYGSTSTAAAFSMVEI 149
S+ L+P+K N P QY T+ A +I
Sbjct: 258 SQNLVPAKTHINTPTQYNDTNATNALKTAKI 288
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 241 SRTLMPSKAFANRPDQYGSTSTAAAFSMVEIFSPVTATSSSTR 113
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -1
Query: 241 SRTLMPSKAFANRPDQYGSTSTAAAFSMVEIFSPVTATSSSTR 113
S+ +P+K N P QY T+ A + SP S T+
Sbjct: 333 SQNFIPAKTHINIPTQYNDTNATKALKTAKPASPSHTYSRQTK 375
>X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein
protein.
Length = 1090
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 33 KAFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFA 212
K+ W L +M +E AC Y + L+D +V + LK+ V WS +
Sbjct: 983 KSGWELPLGEVEMPL-SEKACCYFGMFLLDGEVCSRLADFRSKLKSTPASVIKSWSSMNN 1041
Query: 213 KAL 221
K L
Sbjct: 1042 KVL 1044
>BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p protein.
Length = 1192
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 33 KAFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFA 212
K+ W L +M +E AC Y + L+D +V + LK+ V WS +
Sbjct: 1072 KSGWELPLGEVEMPL-SEKACCYFGMFLLDGEVCSRLADFRSKLKSTPASVIKSWSSMNN 1130
Query: 213 KAL 221
K L
Sbjct: 1131 KVL 1133
>AL009195-2|CAA15706.1| 1192|Drosophila melanogaster
EG:30B8.2,FBgn0001330;kz protein.
Length = 1192
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 33 KAFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFA 212
K+ W L +M +E AC Y + L+D +V + LK+ V WS +
Sbjct: 1072 KSGWELPLGEVEMPL-SEKACCYFGMFLLDGEVCSRLADFRSKLKSTPASVIKSWSSMNN 1130
Query: 213 KAL 221
K L
Sbjct: 1131 KVL 1133
>AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein
protein.
Length = 1192
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 33 KAFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFA 212
K+ W L +M +E AC Y + L+D +V + LK+ V WS +
Sbjct: 1072 KSGWELPLGEVEMPL-SEKACCYFGMFLLDGEVCSRLADFRSKLKSTPASVIKSWSSMNN 1130
Query: 213 KAL 221
K L
Sbjct: 1131 KVL 1133
>AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA
protein.
Length = 1192
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = +3
Query: 33 KAFWRLARITFKMASKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWSGLFA 212
K+ W L +M +E AC Y + L+D +V + LK+ V WS +
Sbjct: 1072 KSGWELPLGEVEMPL-SEKACCYFGMFLLDGEVCSRLADFRSKLKSTPASVIKSWSSMNN 1130
Query: 213 KAL 221
K L
Sbjct: 1131 KVL 1133
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,619,360
Number of Sequences: 53049
Number of extensions: 233841
Number of successful extensions: 708
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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