Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M21
(330 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 159 3e-39
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 159 3e-39
BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein. 31 0.65
BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2 (D... 31 0.65
AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5... 31 0.65
AK074034-1|BAB84860.1| 716|Homo sapiens FLJ00080 protein protein. 31 0.65
AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens ... 31 0.65
EF560746-1|ABQ59056.1| 979|Homo sapiens KIAA1394 protein protein. 29 3.5
BC036557-1|AAH36557.1| 385|Homo sapiens KIAA1394 protein protein. 29 3.5
AB037815-1|BAA92632.1| 1003|Homo sapiens KIAA1394 protein protein. 29 3.5
AF343412-1|AAK51406.1| 97|Homo sapiens psoriasis vulgaris immu... 28 8.0
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 159 bits (385), Expect = 3e-39
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+ F
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL + +NAE
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAE 99
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (385), Expect = 3e-39
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+ F
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL + +NAE
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAE 99
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (385), Expect = 3e-39
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+ F
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL + +NAE
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAE 99
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (385), Expect = 3e-39
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+ F
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL + +NAE
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAE 99
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (385), Expect = 3e-39
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+ F
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL + +NAE
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAE 99
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (385), Expect = 3e-39
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+ F
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL + +NAE
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAE 99
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 159 bits (385), Expect = 3e-39
Identities = 70/99 (70%), Positives = 86/99 (86%)
Frame = +3
Query: 33 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
M RYS +P+NP KSCK+RGSNLRVHFKNT ETA AI+ + +R+A +YLK+VT +K+C+ F
Sbjct: 1 MVRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPF 60
Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
RR+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL + +NAE
Sbjct: 61 RRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAE 99
>BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein.
Length = 649
Score = 31.5 bits (68), Expect = 0.65
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 GYKKTASSPCCPLPKECDR--KEGMHFLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 301
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 333 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 388
>BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2
(Drosophila) protein.
Length = 856
Score = 31.5 bits (68), Expect = 0.65
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 GYKKTASSPCCPLPKECDR--KEGMHFLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 301
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 540 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 595
>AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5
protein.
Length = 827
Score = 31.5 bits (68), Expect = 0.65
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 GYKKTASSPCCPLPKECDR--KEGMHFLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 301
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 511 GQKRTSGAXCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 566
>AK074034-1|BAB84860.1| 716|Homo sapiens FLJ00080 protein protein.
Length = 716
Score = 31.5 bits (68), Expect = 0.65
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 GYKKTASSPCCPLPKECDR--KEGMHFLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 301
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 486 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 541
>AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22341 fis, clone HRC06032. ).
Length = 619
Score = 31.5 bits (68), Expect = 0.65
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 GYKKTASSPCCPLPKECDR--KEGMHFLPSF*RWSWPLCTS*TVWYHTGSLAQEICRI 301
G K+T+ + C P+ C+ G H P WP+CT HTG L + C I
Sbjct: 303 GQKRTSGAVCHQDPRTCEEPASSGAHIWPDDIT-KWPICTEQARSNHTGFLHMD-CEI 358
>EF560746-1|ABQ59056.1| 979|Homo sapiens KIAA1394 protein protein.
Length = 979
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 110 QEHL*NCHGYKKTASS----PCCPLPKECDRKEGMHFLP 214
Q HL + HG A S PCCPL E D + +H +P
Sbjct: 660 QLHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVP 698
>BC036557-1|AAH36557.1| 385|Homo sapiens KIAA1394 protein protein.
Length = 385
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 110 QEHL*NCHGYKKTASS----PCCPLPKECDRKEGMHFLP 214
Q HL + HG A S PCCPL E D + +H +P
Sbjct: 66 QLHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVP 104
>AB037815-1|BAA92632.1| 1003|Homo sapiens KIAA1394 protein protein.
Length = 1003
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = +2
Query: 110 QEHL*NCHGYKKTASS----PCCPLPKECDRKEGMHFLP 214
Q HL + HG A S PCCPL E D + +H +P
Sbjct: 684 QLHLLHHHGPPWPAPSLHAVPCCPLESEADVERAVHQVP 722
>AF343412-1|AAK51406.1| 97|Homo sapiens psoriasis vulgaris
immunoglobulin heavy chain protein.
Length = 97
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 13 SPGRNKKWVVTLGSRITLLSHVKRVAQTFVFT 108
+PG+ +WV ++GSR T + + V F+ +
Sbjct: 25 APGKGLEWVSSIGSRTTYIYYADSVKGRFIIS 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,850,598
Number of Sequences: 237096
Number of extensions: 1150724
Number of successful extensions: 2450
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2450
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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