Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M21
         (330 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p pro...   175   8e-45
AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,...   175   8e-45
AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,...   175   8e-45
AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,...   175   8e-45
AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,...   175   8e-45
AF521598-1|AAN62854.1|  400|Drosophila melanogaster MSP-300/nesp...    29   1.9  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   1.9  
AY102651-1|AAM27480.1|  602|Drosophila melanogaster GH01517p pro...    28   2.5  
AE014297-1927|AAF55121.3|  602|Drosophila melanogaster CG33485-P...    28   2.5  
BT001338-1|AAN71093.1|  501|Drosophila melanogaster AT21229p pro...    26   10.0 
AE014297-4739|AAN14270.1|  501|Drosophila melanogaster CG31003-P...    26   10.0 

>AY060845-1|AAL28393.1|  186|Drosophila melanogaster GM02242p
           protein.
          Length = 186

 Score =  175 bits (427), Expect = 8e-45
 Identities = 81/99 (81%), Positives = 89/99 (89%)
 Frame = +3

Query: 33  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+ F
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQL RNAE
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAE 99


>AE014298-945|AAN09183.1|  186|Drosophila melanogaster CG3203-PD,
           isoform D protein.
          Length = 186

 Score =  175 bits (427), Expect = 8e-45
 Identities = 81/99 (81%), Positives = 89/99 (89%)
 Frame = +3

Query: 33  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+ F
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQL RNAE
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAE 99


>AE014298-944|AAF46194.1|  186|Drosophila melanogaster CG3203-PC,
           isoform C protein.
          Length = 186

 Score =  175 bits (427), Expect = 8e-45
 Identities = 81/99 (81%), Positives = 89/99 (89%)
 Frame = +3

Query: 33  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+ F
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQL RNAE
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAE 99


>AE014298-943|AAN09182.1|  186|Drosophila melanogaster CG3203-PB,
           isoform B protein.
          Length = 186

 Score =  175 bits (427), Expect = 8e-45
 Identities = 81/99 (81%), Positives = 89/99 (89%)
 Frame = +3

Query: 33  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+ F
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQL RNAE
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAE 99


>AE014298-942|AAF46195.1|  186|Drosophila melanogaster CG3203-PA,
           isoform A protein.
          Length = 186

 Score =  175 bits (427), Expect = 8e-45
 Identities = 81/99 (81%), Positives = 89/99 (89%)
 Frame = +3

Query: 33  MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISF 212
           MGRYSRE DN AKSCKARG NLRVHFKNT+ETA AI+++PLRRA RYLK V ++KEC+ F
Sbjct: 1   MGRYSRESDNVAKSCKARGPNLRVHFKNTHETAQAIKRMPLRRAQRYLKAVIDQKECVPF 60

Query: 213 RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQL*RNAE 329
           RRFNGGVGRCAQAKQ+ TTQGRWPKKSAEFLLQL RNAE
Sbjct: 61  RRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLRNAE 99


>AF521598-1|AAN62854.1|  400|Drosophila melanogaster MSP-300/nesprin
           splice variant protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 90  SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISFRRFNGGVGRCAQA 251
           SNL VH ++  E     +KLP   A   L N T  +  +  RR   G+   A A
Sbjct: 288 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 341


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 90   SNLRVHFKNTYETAMAIRKLPLRRAVRYLKNVTEKKECISFRRFNGGVGRCAQA 251
            SNL VH ++  E     +KLP   A   L N T  +  +  RR   G+   A A
Sbjct: 7749 SNLEVHERDAIELKNQAKKLPTDPATERLLNDTVDRIDLLLRRTQQGITMIANA 7802


>AY102651-1|AAM27480.1|  602|Drosophila melanogaster GH01517p
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +2

Query: 155 SPCCPLPKECDRKEGMHFLPSF*RWSWPLCTS*TVWYHTGSLAQE 289
           SP C  P  CD +   HFL S  RW W  C     W+  G+  Q+
Sbjct: 540 SPGCA-PIACDMR---HFLASVLRWQWRWCWR---WHWKGTQQQD 577


>AE014297-1927|AAF55121.3|  602|Drosophila melanogaster CG33485-PA
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +2

Query: 155 SPCCPLPKECDRKEGMHFLPSF*RWSWPLCTS*TVWYHTGSLAQE 289
           SP C  P  CD +   HFL S  RW W  C     W+  G+  Q+
Sbjct: 540 SPGCA-PIACDMR---HFLASVLRWQWRWCWR---WHWKGTQQQD 577


>BT001338-1|AAN71093.1|  501|Drosophila melanogaster AT21229p
           protein.
          Length = 501

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 198 PSFLSHSLGNGQH 160
           P FL H LGNG H
Sbjct: 412 PGFLQHDLGNGDH 424


>AE014297-4739|AAN14270.1|  501|Drosophila melanogaster CG31003-PA
           protein.
          Length = 501

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 198 PSFLSHSLGNGQH 160
           P FL H LGNG H
Sbjct: 412 PGFLQHDLGNGDH 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,927,213
Number of Sequences: 53049
Number of extensions: 348413
Number of successful extensions: 923
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)