Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M20
(338 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 146 8e-37
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 146 8e-37
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 146 8e-37
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 79 2e-16
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 78 3e-16
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 42 3e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 38 6e-04
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 35 0.004
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 35 0.004
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 33 0.016
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 31 0.064
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.064
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 29 0.15
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 27 0.78
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 26 1.8
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 3.2
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 25 3.2
SPBC83.04 |apc15||anaphase-promoting complex subunit Apc15 |Schi... 25 4.2
SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomy... 25 4.2
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 25 4.2
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 24 5.5
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 24 7.3
SPCC1919.02 |||pig-X|Schizosaccharomyces pombe|chr 3|||Manual 24 7.3
SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex s... 24 7.3
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 24 7.3
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 24 7.3
SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large... 23 9.6
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 23 9.6
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 23 9.6
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 23 9.6
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 146 bits (354), Expect = 8e-37
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGID+RTIE+ EKEA E+GKGSFKYA VL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIAL 336
DKLKAERERGITIDIAL
Sbjct: 61 DKLKAERERGITIDIAL 77
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 146 bits (354), Expect = 8e-37
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGID+RTIE+ EKEA E+GKGSFKYA VL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIAL 336
DKLKAERERGITIDIAL
Sbjct: 61 DKLKAERERGITIDIAL 77
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 146 bits (354), Expect = 8e-37
Identities = 69/77 (89%), Positives = 73/77 (94%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGID+RTIE+ EKEA E+GKGSFKYA VL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 286 DKLKAERERGITIDIAL 336
DKLKAERERGITIDIAL
Sbjct: 61 DKLKAERERGITIDIAL 77
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 79.0 bits (186), Expect = 2e-16
Identities = 34/71 (47%), Positives = 52/71 (73%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLK 297
K H+NIV IGHVD+GKST G++++ G +D+RT+E+ E+EA+E GK S+ + LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 298 AERERGITIDI 330
ERE+G T+++
Sbjct: 296 EEREKGKTVEV 306
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 78.2 bits (184), Expect = 3e-16
Identities = 33/69 (47%), Positives = 50/69 (72%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAER 306
+++VV GHVDSGKST G ++++ G I+ R++++ EA GKGSF YA +LD + ER
Sbjct: 178 VHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEER 237
Query: 307 ERGITIDIA 333
RG+T+D+A
Sbjct: 238 ARGVTMDVA 246
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 41.5 bits (93), Expect = 3e-05
Identities = 28/74 (37%), Positives = 37/74 (50%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDK 291
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 292 LKAERERGITIDIA 333
E+ RGITI A
Sbjct: 94 APEEKARGITISSA 107
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 37.5 bits (83), Expect = 6e-04
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 310 RGITIDIA 333
+GITI A
Sbjct: 111 KGITIQSA 118
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 34.7 bits (76), Expect = 0.004
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGK N+ VI HVD GKST T L+ K G I A + G F +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII----------SAAKAGDARF-----M 57
Query: 286 DKLKAERERGITI 324
D E+ERG+TI
Sbjct: 58 DTRADEQERGVTI 70
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 34.7 bits (76), Expect = 0.004
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGK N+ VI HVD GKST T L+ K G I A + G F +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII----------SAAKAGDARF-----M 57
Query: 286 DKLKAERERGITI 324
D E+ERG+TI
Sbjct: 58 DTRADEQERGVTI 70
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 32.7 bits (71), Expect = 0.016
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
N+ +I H+D+GK+T T ++Y GG + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLY-YGGF--------TSHFGNVDTGD----TVMDYLPAERQ 76
Query: 310 RGITIDIA 333
RGITI+ A
Sbjct: 77 RGITINSA 84
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 30.7 bits (66), Expect = 0.064
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERC 231
K ++++G SGK T L ++ G D +T+++C
Sbjct: 278 KPRTKLLLLGPPKSGKKTLLSRLFFQIGSFDPKTMQKC 315
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.064
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
N VI H+D GKST + ++ G I+E + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 310 RGITI 324
RGIT+
Sbjct: 104 RGITV 108
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 29.5 bits (63), Expect = 0.15
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +1
Query: 118 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKY 273
KV+ +++I ++D G L G ID+ T + +K+A+ G+ +F+Y
Sbjct: 591 KVNAQVMLIKNIDD--QLVNGSLGKVIGFIDDETYQMEKKDAEMQGRNAFEY 640
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 27.1 bits (57), Expect = 0.78
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 136 VVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGK 258
+V+GH GK+T +Y+ G + I C + + + K
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVAK 85
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 25.8 bits (54), Expect = 1.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 154 DSGKSTTTGHLIYKCGGIDE 213
+S K TT GH++ +C IDE
Sbjct: 1881 NSVKFTTEGHILLRCMAIDE 1900
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 3.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 100 PKMGKEKVHINIVVIGHVDSGKST 171
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 25.0 bits (52), Expect = 3.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 197 AVVSTNVPSKGARRKPRKWVRVPS 268
A++S + K +P KWV VPS
Sbjct: 224 ALISNGLKVKETSEEPEKWVVVPS 247
>SPBC83.04 |apc15||anaphase-promoting complex subunit Apc15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 24.6 bits (51), Expect = 4.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 211 ERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
E + E + +E+G GSF G +D + + E
Sbjct: 69 EEANQDTELDEEELGSGSFPEEGEMDDMDGDNE 101
>SPAC26A3.17c ||SPAC8E11.11|N-methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 357
Score = 24.6 bits (51), Expect = 4.2
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 189 LQMRWYRRTYHRKVREGSPGNG*GFLQVRWGIG 287
+ M W R+ HR +P G L V +G+G
Sbjct: 165 VMMSWERKIMHRSAEIIAPTKGRRVLNVGFGLG 197
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 24.6 bits (51), Expect = 4.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 302 SAFSLSNTPAYLKEPLPISWASFSHLS 222
S F+LSN L + P + + FSHLS
Sbjct: 228 SQFTLSNISDLLSQSRPDNLSPFSHLS 254
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 24.2 bits (50), Expect = 5.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 133 IVVIGHVDSGKSTTTGHLIYKC 198
IVV+G SGKST + +C
Sbjct: 115 IVVVGETGSGKSTQIPQFLNEC 136
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 23.8 bits (49), Expect = 7.3
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = -1
Query: 317 IPRSRSAFSLSNTPAYLKEPLPISWASFSHLSMVRSSIPPH 195
IP+ A S+ N+ + ++ LP + S V+ +P H
Sbjct: 173 IPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPCC1919.02 |||pig-X|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 23.8 bits (49), Expect = 7.3
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 308 SRSAFSLSNTPAYLKEPLPISWASFSHL 225
S++ ++L N P L +PI+ S+ H+
Sbjct: 276 SKNKYTLQNDPTTLSISIPIADLSYKHV 303
>SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex
subunit Arc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 23.8 bits (49), Expect = 7.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 338 QRAISMVIPRSRSAFSLSNTPAYLK 264
Q A+S +IP++RSA N LK
Sbjct: 33 QAAVSQLIPQARSAIQTGNALQGLK 57
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 23.8 bits (49), Expect = 7.3
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +1
Query: 133 IVVIGHVDSGKSTTTGHLIYKCG 201
++V+G SGK+T +Y+ G
Sbjct: 511 LIVVGETGSGKTTQLAQFLYEDG 533
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 23.8 bits (49), Expect = 7.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDER 216
N ++ HVD GK+T L+ G I +
Sbjct: 21 NFTLLAHVDHGKTTLADSLLASNGIISSK 49
>SPBC651.08c |rpc1||DNA-directed RNA polymerase III complex large
subunit Rpc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1405
Score = 23.4 bits (48), Expect = 9.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 205 IDERTIERCEKEAQEMGKGSFKYAGVLDK 291
I +T E C K+ M + S AGV+DK
Sbjct: 618 IKSKTPEMCPKDGYLMIRNSEIIAGVVDK 646
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLI 189
++ + N++V+G SGKST L+
Sbjct: 91 RQGFNFNVLVLGESGSGKSTLVNTLL 116
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 23.4 bits (48), Expect = 9.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 142 IGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKY 273
I HV G+ L + GG RTIE E E + KG++ +
Sbjct: 297 IAHVRDGE-LHVHRLRREGGGSTTRTIETLEMEIASVMKGNYDH 339
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 23.4 bits (48), Expect = 9.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 302 SAFSLSNTPAYLKEPLPISWASFSH 228
+A SL +++ P+S SFSH
Sbjct: 461 NAISLQQLAVFMRHTAPVSALSFSH 485
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,349,137
Number of Sequences: 5004
Number of extensions: 24476
Number of successful extensions: 97
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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