Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M20
(338 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 138 8e-34
03_01_0547 + 4093196-4093657,4094267-4095148 138 8e-34
03_01_0544 + 4082528-4082989,4083585-4084466 138 8e-34
03_01_0543 + 4076981-4077442,4078145-4079026 138 8e-34
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 81 2e-16
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 81 2e-16
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 53 5e-08
02_04_0462 + 23131433-23132836 36 0.006
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 36 0.008
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 36 0.008
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 36 0.008
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 34 0.025
03_05_0511 + 25056018-25059107 32 0.13
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.17
02_04_0148 - 20198407-20201424 31 0.17
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 31 0.17
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.17
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.30
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.30
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 30 0.53
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 29 0.70
01_06_0662 + 30987187-30987277,30987825-30990214 29 1.2
02_05_1118 + 34241819-34242217,34242350-34242522,34243499-342436... 27 2.8
01_06_0346 + 28590238-28590349,28590678-28590796,28590890-28591312 27 2.8
08_01_0229 + 1834102-1834358,1834442-1834901 27 3.8
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 27 3.8
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 27 5.0
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 27 5.0
05_02_0078 - 6386278-6386291,6386462-6386594,6386721-6388613,639... 26 6.6
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 26 8.7
09_06_0283 + 22024779-22026134,22026181-22026714 26 8.7
01_06_0781 + 31962661-31963089,31963174-31963228,31964310-319645... 26 8.7
01_03_0221 - 13916129-13916504,13917183-13917217 26 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 138 bits (335), Expect = 8e-34
Identities = 68/77 (88%), Positives = 69/77 (89%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IER EKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIAL 336
DKLKAERERGITIDIAL
Sbjct: 61 DKLKAERERGITIDIAL 77
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 138 bits (335), Expect = 8e-34
Identities = 68/77 (88%), Positives = 69/77 (89%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IER EKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIAL 336
DKLKAERERGITIDIAL
Sbjct: 61 DKLKAERERGITIDIAL 77
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 138 bits (335), Expect = 8e-34
Identities = 68/77 (88%), Positives = 69/77 (89%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IER EKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIAL 336
DKLKAERERGITIDIAL
Sbjct: 61 DKLKAERERGITIDIAL 77
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 138 bits (335), Expect = 8e-34
Identities = 68/77 (88%), Positives = 69/77 (89%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVL 285
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGID+R IER EKEA EM K SFKYA VL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 286 DKLKAERERGITIDIAL 336
DKLKAERERGITIDIAL
Sbjct: 61 DKLKAERERGITIDIAL 77
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 81.4 bits (192), Expect = 2e-16
Identities = 34/70 (48%), Positives = 52/70 (74%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAER 306
+N+ ++GHVDSGKST +G L++ G I ++ + + EKEA+E GKGSF YA +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 307 ERGITIDIAL 336
ERG+T+ +A+
Sbjct: 308 ERGVTMTVAV 317
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 81.4 bits (192), Expect = 2e-16
Identities = 34/70 (48%), Positives = 52/70 (74%)
Frame = +1
Query: 127 INIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAER 306
+N+ ++GHVDSGKST +G L++ G I ++ + + EKEA+E GKGSF YA +D+ ER
Sbjct: 248 LNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEER 307
Query: 307 ERGITIDIAL 336
ERG+T+ +A+
Sbjct: 308 ERGVTMTVAV 317
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 53.2 bits (122), Expect = 5e-08
Identities = 22/59 (37%), Positives = 41/59 (69%)
Frame = +1
Query: 154 DSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERERGITIDI 330
D+GKST G +++ G +D+RTI++ EKEA++ + S+ A ++D + ER +G T+++
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEV 62
>02_04_0462 + 23131433-23132836
Length = 467
Score = 36.3 bits (80), Expect = 0.006
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 103 KMGKEKVHINIVVIGHVDSGKSTTTGHL---IYKCGGIDERTIERCEKEAQEMGKG 261
K + K H+NI IGHVD GK+T T L + GG + + + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 35.9 bits (79), Expect = 0.008
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
N +I HVD GKST L+ G TI++ G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTG-----TIKK--------GHGQPQY---LDKLQVERE 102
Query: 310 RGITI 324
RGIT+
Sbjct: 103 RGITV 107
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +1
Query: 250 MGKGSFKYAGVLDKLKAERERGITIDIAL 336
+GKGSF YA +D+ ERERGIT+ + +
Sbjct: 276 IGKGSFAYAWAMDESADERERGITMTVGV 304
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 35.9 bits (79), Expect = 0.008
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
NI + H+DSGK+T T ++Y G I E E+ +G +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI---------HEIHEV-RGRDGVGAKMDSMDLERE 119
Query: 310 RGITIDIA 333
+GITI A
Sbjct: 120 KGITIQSA 127
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 34.3 bits (75), Expect = 0.025
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +1
Query: 112 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDK 291
+ K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAI---------------TKVLAEAGKAKAVAFDEIDK 107
Query: 292 LKAERERGITIDIA 333
E+ RGITI A
Sbjct: 108 APEEKARGITIATA 121
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.13
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 31.5 bits (68), Expect = 0.17
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +1
Query: 124 HINIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAE 303
HI+ V++ H+D+GK+TTT ++Y G + E +G+ +D ++ E
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTGR---------NYKIGEFQEGTV----TMDWMEQE 150
Query: 304 RERGITI 324
+ERGITI
Sbjct: 151 QERGITI 157
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.17
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
N ++ HVD GK++ HLI G E+ E GS A V+D L+ E+
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS---------ERRVSERMAGS---ARVMDHLEEEQR 65
Query: 310 RGITIDIA 333
R IT+ A
Sbjct: 66 RAITMKSA 73
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 31.5 bits (68), Expect = 0.17
Identities = 25/67 (37%), Positives = 32/67 (47%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
N +I H+D GKST L+ G + +R EM K F LD + ERE
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR----------EM-KQQF-----LDNMDLERE 122
Query: 310 RGITIDI 330
RGITI +
Sbjct: 123 RGITIKL 129
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERT---IERCEKEAQEMGKG-SFKY 273
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 274 AGV 282
G+
Sbjct: 73 TGI 75
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 30.7 bits (66), Expect = 0.30
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 106 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDERT---IERCEKEAQEMGKG-SFKY 273
M K+ N+ VI HVD GKST T L+ G I + + + A E +G + K
Sbjct: 13 MDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKS 72
Query: 274 AGV 282
G+
Sbjct: 73 TGI 75
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 310 AHARPLVCPIPQRT*RNPYPFPGLPSR 230
A ARP + P+P+R + +PFP P R
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKR 377
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 29.5 bits (63), Expect = 0.70
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERT---IERCEKEAQEMGKG-SFKYAGV 282
N+ VI HVD GKST T L+ G I + + + A E +G + K G+
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGI 75
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N+ V+ HVD GKST T L+ G
Sbjct: 21 NMSVVAHVDHGKSTLTDSLVAAAG 44
>02_05_1118 +
34241819-34242217,34242350-34242522,34243499-34243660,
34243762-34243903,34244320-34244544,34244649-34244711,
34244817-34244891,34245198-34245404,34247274-34247465,
34247515-34247634
Length = 585
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 151 VDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERERGITIDI 330
V S S T L+ + G D ++R ++A ++ + + V D + RE+G T+D+
Sbjct: 428 VFSKSSRETAKLVARWFGPDSDELKRMSEKALKLAQPEAVFDIVRDIHELSREQGPTVDV 487
Query: 331 AL 336
+
Sbjct: 488 TI 489
>01_06_0346 + 28590238-28590349,28590678-28590796,28590890-28591312
Length = 217
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 317 IPRSRSAFSLSNTPAYLKEPLPISWASFSHL--SMVRSSIPPH 195
+P + SL PA L P P+ + SHL +V SS PH
Sbjct: 109 VPTPPLSLSLFVDPALLPSPTPVVIPTLSHLPTQLVVSSTQPH 151
>08_01_0229 + 1834102-1834358,1834442-1834901
Length = 238
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +3
Query: 198 RWYRRTYHRKVREGSPGNG*GFLQVRWG 281
RW RR R GS GNG RWG
Sbjct: 144 RWGRRRGGGATRWGSDGNGGAVSATRWG 171
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 118 KVHINIVVIGHVDSG 162
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 298 PLVCPIPQRT*RNPYPFPGLPSRTFRWYVR 209
PL+ P P R PF +P+R+F WY R
Sbjct: 46 PLL-PSPPRLPPLLVPFAAVPARSFSWYPR 74
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDERTIERCEKEAQEMGKGSFKYAGVLDKLKAERE 309
NI ++ HVD GK+T + + + + R + QE ++D ERE
Sbjct: 121 NIAIVAHVDHGKTTLVDSM------LRQAKVFRDNQVVQER---------IMDSNDLERE 165
Query: 310 RGITI 324
RGITI
Sbjct: 166 RGITI 170
>05_02_0078 -
6386278-6386291,6386462-6386594,6386721-6388613,
6391153-6391239,6391691-6391765,6393982-6394327,
6394428-6394450
Length = 856
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -2
Query: 250 FPGLPSRTFRWYVRRYH 200
FP +P R FRW+V H
Sbjct: 31 FPPMPIRRFRWWVDELH 47
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 100 PKMGKEKVHINIVVIGHVDSGKST 171
P++ + INI IGHV GKST
Sbjct: 52 PEVISRQATINIGTIGHVAHGKST 75
>09_06_0283 + 22024779-22026134,22026181-22026714
Length = 629
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 205 IDERTIERCEKEAQEMGKGSFKYAGVLDKLKAE 303
+ +RT E C+ + E+G +F++ +D L +E
Sbjct: 369 LKDRTTELCDNQPMELGDITFEFFTNIDTLLSE 401
>01_06_0781 +
31962661-31963089,31963174-31963228,31964310-31964557,
31965080-31965281,31965793-31965912,31965976-31966100,
31966182-31966288,31966726-31966792
Length = 450
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 286 PIPQRT*RNPYPFPGLP 236
P +RT +PYP PGLP
Sbjct: 71 PAGRRTLASPYPSPGLP 87
>01_03_0221 - 13916129-13916504,13917183-13917217
Length = 136
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 230 ARRKPRKWVRVPSSTLGYW 286
ARR PR +R+ S +G+W
Sbjct: 23 ARRVPRPRIRIAESLMGHW 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,013,440
Number of Sequences: 37544
Number of extensions: 172597
Number of successful extensions: 530
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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