Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M18
(308 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 70 1e-12
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 70 1e-12
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 70 1e-12
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 70 1e-12
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 70 1e-12
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 70 1e-12
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 70 1e-12
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 70 1e-12
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 70 1e-12
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 68 5e-12
BC040341-1|AAH40341.1| 1063|Homo sapiens KIAA1618 protein. 29 2.8
BC036891-1|AAH36891.1| 1063|Homo sapiens KIAA1618 protein. 29 2.8
AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein. 29 2.8
AL139247-1|CAI21679.1| 95|Homo sapiens late cornified envelope... 29 3.7
AB023149-1|BAA76776.2| 1078|Homo sapiens KIAA0932 protein protein. 28 4.8
AK123704-1|BAC85680.1| 233|Homo sapiens protein ( Homo sapiens ... 28 6.4
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 129 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 188
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 189 KKEEIIKTLSKEEE 202
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
Query: 128 XXXELLQTFAREDE 87
E+++T ++E+E
Sbjct: 180 KKEEIIKTLSKEEE 193
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = -1
Query: 308 YHSLYMKAKGNVFKNKRVLMEYIHRKKPEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXX 129
YHSLY+K KGNVFKNKR+LME+IH+ K +KAR K+L+DQ
Sbjct: 101 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 160
Query: 128 XXXELLQTFARED 90
E+++T ++E+
Sbjct: 161 KKEEIIKTLSKEE 173
>BC040341-1|AAH40341.1| 1063|Homo sapiens KIAA1618 protein.
Length = 1063
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 222 EG*DQDA**PS--RGAPQQGEGSPQAPRGAHRREE 124
EG DQDA PS RG Q+G G P + H R E
Sbjct: 201 EGEDQDASIPSGGRGLSQEGTGPPTSAGEGHSRTE 235
>BC036891-1|AAH36891.1| 1063|Homo sapiens KIAA1618 protein.
Length = 1063
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 222 EG*DQDA**PS--RGAPQQGEGSPQAPRGAHRREE 124
EG DQDA PS RG Q+G G P + H R E
Sbjct: 201 EGEDQDASIPSGGRGLSQEGTGPPTSAGEGHSRTE 235
>AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein.
Length = 1415
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -3
Query: 222 EG*DQDA**PS--RGAPQQGEGSPQAPRGAHRREE 124
EG DQDA PS RG Q+G G P + H R E
Sbjct: 66 EGEDQDASIPSGGRGLSQEGTGPPTSAGEGHSRTE 100
>AL139247-1|CAI21679.1| 95|Homo sapiens late cornified envelope 3B
protein.
Length = 95
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 116 VPPSSRRCAPR-GACGLPSPCCGAPLLGH 199
+PP+S CAPR G CG PS G L H
Sbjct: 30 LPPASSCCAPRPGCCGGPSSEGGCCLSHH 58
>AB023149-1|BAA76776.2| 1078|Homo sapiens KIAA0932 protein protein.
Length = 1078
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 122 PSSRRCAPRGACGLPSPCCGA 184
P R+ APR AC P PC A
Sbjct: 5 PRRRQGAPRSACSAPEPCPAA 25
>AK123704-1|BAC85680.1| 233|Homo sapiens protein ( Homo sapiens
cDNA FLJ41710 fis, clone HLUNG2011041, weakly similar
to Basic proline-rich peptide IB-8a. ).
Length = 233
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 189 RGAPQQGEGSPQA-PRGAHRREEGGT 115
R P QG+G PQA P+G R GG+
Sbjct: 193 RAGPPQGQGVPQAGPQGLSRGTAGGS 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,889,145
Number of Sequences: 237096
Number of extensions: 641159
Number of successful extensions: 2023
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2023
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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