Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M17
(179 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 20 3.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 20 3.1
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 3.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 3.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 19 4.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 19 4.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 19 4.1
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 19 4.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 19 4.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 19 7.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 19 7.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 19 7.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 19 7.2
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 19 7.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 19 7.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 18 9.6
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 18 9.6
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 18 9.6
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 3.1
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 72 SKNIPGTTIEM--SANSSPSPIVRSPVHQSPLDSL 170
S ++P +E S+N + P+VR P +D +
Sbjct: 352 SMDLPSDQVEPDNSSNFAMKPLVRQPEDTMSVDRM 386
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 19.8 bits (39), Expect = 3.1
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = +3
Query: 72 SKNIPGTTIEM--SANSSPSPIVRSPVHQSPLDSL 170
S ++P +E S+N + P+VR P +D +
Sbjct: 352 SMDLPSDQVEPDNSSNFAMKPLVRQPEDTMSVDRM 386
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 114 SSPSPIVRSPVHQS 155
S+P+P+V VH S
Sbjct: 1111 STPAPVVLEAVHAS 1124
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +2
Query: 83 SWNNHRNVCKFISVPYSEVSGTSKPFRF 166
+W H NV K ++ ++V T F
Sbjct: 1676 TWGYHHNVNKHCTIHRTQVKETDDKICF 1703
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 31 KLKQEAPELTPSAIVKIFL 87
KL + P+L S + KI+L
Sbjct: 673 KLTETNPKLARSVLYKIYL 691
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 19.4 bits (38), Expect = 4.1
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 80 YSWNNHRNVCKFISVPYSEVSGTSKPFRFI 169
+S + +C + V Y+ +SG +P RFI
Sbjct: 135 FSMERYLAICHPLRV-YT-ISGLKRPIRFI 162
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 74 TMADGVSSGASCFSFITIFHGDP 6
++ADG G SC + HG P
Sbjct: 423 SLADGARFGGSC-----LIHGPP 440
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 74 TMADGVSSGASCFSFITIFHGDP 6
++ADG G SC + HG P
Sbjct: 423 SLADGARFGGSC-----LIHGPP 440
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -3
Query: 123 TEMNLQTFLWLF 88
T +NL WLF
Sbjct: 30 TSLNLSNLFWLF 41
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -2
Query: 121 GDEFADISMVVPGIFLLW 68
GDE +++ +PGI +++
Sbjct: 367 GDEIVMLTLTLPGIGVVY 384
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +2
Query: 80 YSWNNHRNVCK--FISVPYSE 136
Y+ NN+ N CK + ++ Y E
Sbjct: 100 YNNNNYNNNCKKLYYNINYIE 120
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +2
Query: 80 YSWNNHRNVCK--FISVPYSE 136
Y+ NN+ N CK + ++ Y E
Sbjct: 100 YNNNNYNNNCKKLYYNINYIE 120
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +2
Query: 80 YSWNNHRNVCK--FISVPYSE 136
Y+ NN+ N CK + ++ Y E
Sbjct: 100 YNNNNYNNNCKKLYYNINYIE 120
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +2
Query: 80 YSWNNHRNVCK--FISVPYSE 136
Y+ NN+ N CK + ++ Y E
Sbjct: 100 YNNNNYNNNCKKLYYNINYIE 120
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3
Query: 111 NSSPSPIVRSPVH 149
++SPSP SP H
Sbjct: 59 HNSPSPTGSSPQH 71
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = -1
Query: 113 ICRHFYGCSRNIFTMAD 63
I R FY N++ + D
Sbjct: 224 IARQFYNDDANVYILPD 240
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 18.2 bits (35), Expect = 9.6
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -1
Query: 134 HYRGRR*ICRHFYGCSRNI 78
HY R + R G +RNI
Sbjct: 1833 HYGSRGSVGRRSVGSARNI 1851
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/24 (25%), Positives = 11/24 (45%)
Frame = +1
Query: 46 APELTPSAIVKIFLEQP*KCLQIH 117
AP+ P + + E +C+ H
Sbjct: 26 APDWVPPEVFDLVAEDKARCMSEH 49
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/24 (25%), Positives = 11/24 (45%)
Frame = +1
Query: 46 APELTPSAIVKIFLEQP*KCLQIH 117
AP+ P + + E +C+ H
Sbjct: 26 APDWVPPEVFDLVAEDKARCMSEH 49
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,444
Number of Sequences: 438
Number of extensions: 900
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 39
effective length of database: 129,261
effective search space used: 2585220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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