Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M16
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 286 7e-78
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 282 9e-77
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 268 2e-72
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 177 5e-45
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 141 3e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 138 3e-33
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 135 2e-32
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 134 5e-32
03_01_0034 + 318432-318825,318902-319851 134 5e-32
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 132 1e-31
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 132 2e-31
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 123 7e-29
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 105 2e-23
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.49
08_02_1633 + 28392378-28393445 30 0.86
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.1
09_01_0060 - 942762-943448,943840-943867,944044-944077,944383-94... 29 1.5
12_02_0667 + 21682386-21682944,21683042-21683201,21683419-216834... 29 2.0
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.0
09_04_0445 - 17677126-17677512,17677608-17678564 29 2.6
06_01_0111 + 870781-871017,871194-871240,871681-871947,872196-87... 29 2.6
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 29 2.6
12_02_0823 + 23461423-23462124 28 3.5
04_03_0868 - 20420298-20420915 28 3.5
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 3.5
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 25 3.8
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 4.6
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 6.0
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 27 6.0
10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243 27 8.0
07_03_0686 + 20697493-20697927 27 8.0
06_01_1088 - 8926361-8927301,8927437-8927705,8927850-8929023,892... 27 8.0
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 27 8.0
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 286 bits (701), Expect = 7e-78
Identities = 124/139 (89%), Positives = 135/139 (97%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 386 RIRKLADQCTGLQGFLIFH 442
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 282 bits (692), Expect = 9e-77
Identities = 122/139 (87%), Positives = 134/139 (96%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 386 RIRKLADQCTGLQGFLIFH 442
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 268 bits (656), Expect = 2e-72
Identities = 114/139 (82%), Positives = 131/139 (94%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
HVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 386 RIRKLADQCTGLQGFLIFH 442
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 177 bits (430), Expect = 5e-45
Identities = 78/102 (76%), Positives = 92/102 (90%)
Frame = +2
Query: 137 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 316
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 317 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 442
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFN 199
Score = 81.4 bits (192), Expect = 4e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 142
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 141 bits (341), Expect = 3e-34
Identities = 65/145 (44%), Positives = 91/145 (62%)
Frame = +2
Query: 8 EKTQYKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 187
+K + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 188 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 367
E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 368 VDLVLDRIRKLADQCTGLQGFLIFH 442
+D VLD +RK A+ C LQGF + H
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCH 317
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 138 bits (333), Expect = 3e-33
Identities = 65/142 (45%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 196
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 197 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 376
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 377 VLDRIRKLADQCTGLQGFLIFH 442
VLD +RK A+ C LQGF + H
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCH 137
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 135 bits (327), Expect = 2e-32
Identities = 62/139 (44%), Positives = 87/139 (62%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 386 RIRKLADQCTGLQGFLIFH 442
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 134 bits (323), Expect = 5e-32
Identities = 60/139 (43%), Positives = 87/139 (62%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 386 RIRKLADQCTGLQGFLIFH 442
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 134 bits (323), Expect = 5e-32
Identities = 61/139 (43%), Positives = 85/139 (61%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 386 RIRKLADQCTGLQGFLIFH 442
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 132 bits (320), Expect = 1e-31
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 386 RIRKLADQCTGLQGFLIFH 442
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 132 bits (318), Expect = 2e-31
Identities = 61/134 (45%), Positives = 84/134 (62%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 386 RIRKLADQCTGLQG 427
+RK A+ C LQG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 123 bits (297), Expect = 7e-29
Identities = 58/133 (43%), Positives = 80/133 (60%)
Frame = +2
Query: 26 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 205
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 206 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 385
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 386 RIRKLADQCTGLQ 424
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 105 bits (252), Expect = 2e-23
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 2/140 (1%)
Frame = +2
Query: 29 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 208
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 209 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 382
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 383 DRIRKLADQCTGLQGFLIFH 442
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 165 SSPPPMVLSVGI*PSGWMPCSRQYSSQ 85
S P P+ LS I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>08_02_1633 + 28392378-28393445
Length = 355
Score = 30.3 bits (65), Expect = 0.86
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 392 ECGRGPSLRFPFQWCSDHEHSCLRHPPY 309
+C P L P W + +H C HPP+
Sbjct: 260 DCPNHPPLTTPRSWDAHDDHDCPNHPPH 287
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 162 SPPPMVLSVGI*PSGWMPCSRQYSSQ 85
+P P+ LSV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>09_01_0060 -
942762-943448,943840-943867,944044-944077,944383-944437
Length = 267
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = -2
Query: 461 RCHHRTSGR*GIPGDLCIGQRVCECGRGPSLRFPFQ--WCSDHEHSCLRHP 315
RCH RT R G G GQRV G G R W +D HP
Sbjct: 87 RCHRRTRWRAGGEGSSGGGQRVSSFGSGGRQRASSSVVWVADQSAPIADHP 137
>12_02_0667 +
21682386-21682944,21683042-21683201,21683419-21683467,
21683570-21683683,21683794-21684294,21684594-21684980,
21685074-21685172,21685380-21685478,21685817-21685890,
21686387-21687023
Length = 892
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/75 (24%), Positives = 36/75 (48%)
Frame = -3
Query: 349 VVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVE 170
+V + VV G+ L ++ +W + + + ++ Y+G +I L S G R+E
Sbjct: 568 IVYIAFVVHGVCLYINRTWWKQTTWMYLAIPILLYAGERIFR-----ALRSHGFTTVRIE 622
Query: 169 GVVSTPDGLVSWHLT 125
V P +++ H+T
Sbjct: 623 KVAIYPGNVIAIHMT 637
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 159 PPPMVLSVGI*PSGWMPCSR 100
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>09_04_0445 - 17677126-17677512,17677608-17678564
Length = 447
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 265 WHIQTVVSSRTTYHW*GGCRKQLCSWSLHHWKGNRRLGPRP 387
WH + + ++H GCR + W+L H G RLG P
Sbjct: 157 WHGISALIPFASWHARSGCRARPARWALFH-HGEVRLGMSP 196
>06_01_0111 +
870781-871017,871194-871240,871681-871947,872196-872848,
872997-873043,873124-873169,873371-873416,873592-873720,
873822-873942
Length = 530
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +3
Query: 69 RSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL 245
+S MP + + TA+ L R LT S V + P + + P TF PSSS +PL
Sbjct: 191 QSNMPPITTETIETANKL--RQDLTNASTVNSAPMSNT---PSQTPTFVSPSSSSTSPL 244
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 153 PMVLSVGI*PSGWMPCSRQYSSQ 85
P+ LS I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>12_02_0823 + 23461423-23462124
Length = 233
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 60 PESRSEMPAGSCIAL--STASNLMVRCQLTRPSGVETTPSTRSSARP-ELASTFPVPS 224
P S+ + AG + TA RC LTR +G + P + P EL F PS
Sbjct: 159 PRSQRVVGAGGAVVACRGTADYFKARCPLTRTTGSDVEPVPQHCLAPGELKVVFCQPS 216
>04_03_0868 - 20420298-20420915
Length = 205
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +1
Query: 346 LHHWKG--NRRLGPRPHSQTR*PMHRSP 423
LH +K +RLGPRP +Q+R P H P
Sbjct: 10 LHCYKAPEEQRLGPRPATQSRPPPHLLP 37
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 195 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQ 326
E A++ P+P+S L+P A A +C + N+S R P+
Sbjct: 2 EAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISCARAAPR 45
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 11/73 (15%), Positives = 31/73 (42%)
Frame = -3
Query: 325 CGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVEGVVSTPDG 146
CG L++D +F L +C S +++ D + ++ + +++ + +
Sbjct: 1035 CGNTLSTDSVFSSGALRICMSGVSSSHASGSSSLDDESSSISQTSYISSKIQAAIDILNS 1094
Query: 145 LVSWHLTIRLDAV 107
+++ + D V
Sbjct: 1095 IINTYALTDSDTV 1107
Score = 21.8 bits (44), Expect(2) = 3.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 367 DFLSNGVVTTSIVVCGILLTSD 302
D L GV+ +S + G+LL D
Sbjct: 979 DNLITGVIQSSFAIFGLLLRQD 1000
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 72 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSI 233
SE+P S + S A ++ PS E T + ++RP A FP P S++
Sbjct: 868 SELPQTSTTSNSEAQEETAAIRVASPSVSEVTVT---ASRPSSAPVFPAPRSTV 918
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 122 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 217
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 27.5 bits (58), Expect = 6.0
Identities = 25/95 (26%), Positives = 42/95 (44%)
Frame = -3
Query: 355 NGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEER 176
+GVV V G+ T D + ++ V S ++ G G++++ +GLA
Sbjct: 290 SGVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPA 349
Query: 175 VEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISD 71
+ VS D L + TI LD I + G++D
Sbjct: 350 IGHTVSNSDILTALP-TIELDP--PTISMTFGVND 381
>10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243
Length = 724
Score = 27.1 bits (57), Expect = 8.0
Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Frame = -3
Query: 388 AVEDQVYDFLSNGVVTTSIVVCGILLTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGN 209
A E +V S G + C + + +W A +V +G +D DG G
Sbjct: 167 AKEFKVVRMFSEGHYEETATRCEVFVLDSPAYWRPAAGKPPPACIVENTGVFLDSDGGG- 225
Query: 208 VLASSGLAEERVEGVVSTPD------GLVSWHLTIR---LDAVLKAIQLPAG 80
+ S +A+E + + P G+ W + R LD L Q G
Sbjct: 226 -MVSFNVADESFGSLPAPPPLAAAVYGVADWRIRERMTELDGCLCVCQYACG 276
>07_03_0686 + 20697493-20697927
Length = 144
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 212 PRAVFVDLEPTVV-DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 367
P+ F LEP+V+ DE T + + E L++GKE+ + + +G+E+
Sbjct: 5 PKDDFDFLEPSVLLDETHYQTGFKNGYSEGLVSGKEEGRQVGLKNGFQVGEEL 57
>06_01_1088 -
8926361-8927301,8927437-8927705,8927850-8929023,
8929132-8929399
Length = 883
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +3
Query: 78 MPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTR 257
MP S + +L + C+L P G+ PS R R + S V + L LT
Sbjct: 808 MPVDSFVGFKYLQDLKIHCKLLCPQGMVLPPSLR---RLSIVSGRKVDFPACLQS--LTS 862
Query: 258 SALAHTDSC 284
+ H SC
Sbjct: 863 LNILHLSSC 871
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 35 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 214
CI + V IG C C G DK GDD +ET HVP
Sbjct: 2740 CIEISVDGKFALIGT-CLSNSCNRDGFSAIDDYELDKP--NGDDDLPEL-NETKPSVHVP 2795
Query: 215 RAVFVDL 235
F+DL
Sbjct: 2796 SVCFIDL 2802
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,654,558
Number of Sequences: 37544
Number of extensions: 388721
Number of successful extensions: 1383
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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