Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M14
(547 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 32 0.048
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 30 0.26
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.34
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.59
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 29 0.59
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 29 0.59
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 28 0.78
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 28 1.0
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 27 1.8
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 27 1.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.8
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.8
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 1.8
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 27 1.8
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 2.4
SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|c... 26 3.2
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 26 3.2
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 26 4.2
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 4.2
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 4.2
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 25 5.5
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 5.5
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 25 5.5
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 25 5.5
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 25 5.5
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 7.3
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 25 7.3
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 25 7.3
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 7.3
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 9.6
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 25 9.6
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 25 9.6
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 9.6
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 25 9.6
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 9.6
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 32.3 bits (70), Expect = 0.048
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +1
Query: 334 KLREVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 492
K+ E Q + Q+L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 504 KVSESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
Score = 25.8 bits (54), Expect = 4.2
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 153 DLEKHAQDFQKTISEQFIAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 308
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLE 1386
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 29.9 bits (64), Expect = 0.26
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 318 TDANGKAKGSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EHTKGEPEP 488
T +N K S P+ P G H+R + + ET H ++ P +HT+ E P
Sbjct: 670 TVSNHHRKESIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQHTRQESLP 729
Query: 489 GE 494
+
Sbjct: 730 SQ 731
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 318 TDANGKAKGSAPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EHTKGEPEP 488
T+ K S P+ P G H+R + + ET H ++ P +H + E P
Sbjct: 702 TETKHLRKESTPSKQPTEGQHTRQESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLP 761
Query: 489 GE 494
+
Sbjct: 762 SQ 763
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.34
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 349 LQQARQNLERTVEDLRKAHPDVEK 420
++QAR E T+ED+++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 28.7 bits (61), Expect = 0.59
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 405 PRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETG 536
P R ++ ++RE NR T+ G + HGS LT+TG
Sbjct: 15 PSRASSNTHLSREGTNRSSNVTRTV----SGRKSNHGSSLTDTG 54
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 28.7 bits (61), Expect = 0.59
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +1
Query: 346 VLQQARQNLERTVEDLRK--AHPDVEKQATALHEKLQTAIQNTLKESQ---NLAKEVGVN 510
+LQQ R NLER +D+ +E+ A EK + +QN +K S+ N A G+N
Sbjct: 246 ILQQIRFNLERICQDIGNFDVRSRIERAARQAREKNEKLLQN-VKTSEIPINAADLEGIN 304
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 28.7 bits (61), Expect = 0.59
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +1
Query: 355 QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQT 522
Q ++ LER VE+LRK + D VE +A + + + E Q L K++ T
Sbjct: 138 QGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLYKDMEQENAST 197
Query: 523 SQKLAPKL 546
QKL K+
Sbjct: 198 IQKLTSKI 205
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 28.3 bits (60), Expect = 0.78
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +3
Query: 114 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFIAIVNSKNTESLNKALKEGSDSMV 275
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 276 QQVSELSNSLQGA 314
+QVS L L+ A
Sbjct: 125 KQVSSLVRFLRFA 137
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 27.9 bits (59), Expect = 1.0
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +3
Query: 216 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKG---SAPTSSPELGAHSR 386
N N K K S++ + + +SL ALT N + S+PT++P+LG R
Sbjct: 204 NIYNARQERKKSKLSSNNPSDNNTTMKSSLNQALTLINLPEQPFSISSPTATPQLGVVKR 263
Query: 387 GSPQGAP 407
SP P
Sbjct: 264 TSPLRFP 270
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 27.1 bits (57), Expect = 1.8
Identities = 10/44 (22%), Positives = 26/44 (59%)
Frame = +1
Query: 352 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 483
++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 85 RKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 27.1 bits (57), Expect = 1.8
Identities = 11/43 (25%), Positives = 18/43 (41%)
Frame = -3
Query: 461 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSLSF 333
W+ + S + F T+G R S + FWR + + F
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWRISYDAGIGF 147
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +1
Query: 361 RQNLERTVEDLRKAHPDVEKQ------ATALHEKLQTAIQNTLKESQNLAKEVGV 507
+Q L EDLRK D EK+ A + +KL+ L++ ++L KE+ +
Sbjct: 1045 KQQLLLVTEDLRKTREDYEKELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 69 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 176
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 132 APNTILQDLEKHAQDFQKT--ISEQFIAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 305
A + +++ HA+ + T ISE V +TES N+A+K+ D+ ++ +SE L
Sbjct: 159 ATDICVKETALHARHWYNTYIISEA----VKGSSTESHNQAIKDFRDAKIEVISEKDPIL 214
Query: 306 Q 308
Q
Sbjct: 215 Q 215
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 183 KTISEQFIAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 302
KT+S++ + + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 2.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 373 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 480
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 446 SFSCNAVACFSTSGCALRRSSTVRSKFWRACWSTSLSFPVCV 321
SF C + CF+ C +++ S+ + F C + SLS CV
Sbjct: 23 SFHCFFLLCFTVMLCVVQQCSSAMTSF--RCPTFSLSKYTCV 62
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 26.2 bits (55), Expect = 3.2
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +3
Query: 147 LQDLEKHAQDFQKTISEQFIAI-VNSKNTESLNKA--LKEGSDSMVQQVSELSNSLQG-A 314
+ +LE + + SE + + + +LN+ L+E D++++Q + S + + +
Sbjct: 230 IAELEAQLEMYMSGKSEDDLLFSLQQERDYALNQVEILQERVDTLMKQKANSSTANEKLS 289
Query: 315 LTDANGKAKGSAPTSSPELGAHSRGSPQGAPRRRET 422
+++ +A SP+ G S P+ P+RR+T
Sbjct: 290 HMESSSPTLTNASFESPKRGKGSNDLPENHPQRRQT 325
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 396 AEILDCALQVLASLLEHFP*LSRLRRS 316
++++DC LAS+L H L RL R+
Sbjct: 473 SDVMDCCFSFLASILTHSIALPRLLRT 499
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 4.2
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +3
Query: 147 LQDLEKHAQDFQKTISEQFIAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 326
L+DLE+H D K I IA + T K +E D +++ + +S++ +T+
Sbjct: 85 LEDLERHVDDCNKRID---IAEARREKT----KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 327 NGKAK 341
AK
Sbjct: 138 EALAK 142
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 320 RRKRES*GKCSNKLARTWSAQSRISARRTPTSRNKPPHYTRSCKP 454
+R+ E +C+ +LA +++ R+T R P R+ KP
Sbjct: 86 QRQLEEDERCARELANRYNSHRPERRRKTNNDRRNYPPQNRTAKP 130
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 25.4 bits (53), Expect = 5.5
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Frame = +3
Query: 144 ILQDLEKHAQDFQKT-ISEQFIAIVNSKNTESLNKALKEGSDSMVQQVSELS-NSLQGAL 317
IL L K+ + F+ + A+ N + ++ L E + + V + NS + +
Sbjct: 74 ILNALGKYEETFRHVDFGPVYAALRNETCPKKIDAILSEVAKNPADYVERIGGNSNKDTI 133
Query: 318 ---TDANGKAKGSAPTSSPELGAHSRGSPQGAP 407
+ A+ + PT PE G + S GAP
Sbjct: 134 EITSSTKPHAQNAVPTFHPEYGRYMLESTPGAP 166
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 11 RRRPGNFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 124
R+ N S R RH HGR P R+D P
Sbjct: 243 RKERYNVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 25.4 bits (53), Expect = 5.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 325 QTGKLREVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTA 456
Q KL+ L+ AR +L+ ++ED KA+ + E+ LQT+
Sbjct: 34 QLSKLK--LEDARADLQSSMEDSNKANGNGEETTDGAEGVLQTS 75
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 382 LCAPSSGELVGALPLAFPFASVNAPCRLLDNSE 284
LC S GE + P SV CR++ N+E
Sbjct: 505 LCVASDGEGRKTVKEEIPIKSVGMRCRMVKNNE 537
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 25.4 bits (53), Expect = 5.5
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +3
Query: 114 AMVRRDAPNTILQDLEKHAQDFQKTISEQFIA--IVNSKNTESLNKALKEGSDSMVQQVS 287
+M R A + +K + D T S+Q + +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 288 E-LSNSLQGALTDANGKAKGSAPTSSPELGAHSR 386
+ NSL +L+ ++ + S L SR
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLDVSSR 165
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -1
Query: 145 IVLGASR-RTIAP*ARATQANNTKHLA 68
+ LG SR TI+P RA Q++ ++HLA
Sbjct: 214 LALGLSRVYTISPAFRAEQSHTSRHLA 240
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 25.0 bits (52), Expect = 7.3
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Frame = +3
Query: 141 TILQDLEKHAQDF-QKTISEQFIAIVNSKNTE--------SLNKALKE---GSDSMVQQV 284
T L++++ +D Q I E + + N KN E L K LKE SDS +
Sbjct: 31 TSLKEIDAQVRDIRQNVIQEIGVVLKNEKNDELSGEERCERLQKTLKEILPYSDSKICLA 90
Query: 285 SELSNSLQGALT--DAN---------GKAKGSAPTSSPELGAHSRGSPQGAPRRRET 422
++ N+++ + DA + + P + HS +PQ + RRRET
Sbjct: 91 TDAMNNIKSCIDRLDAGFEYVELEIPQQLRLGYPDDRALMNYHSTVTPQTSERRRET 147
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 25.0 bits (52), Expect = 7.3
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 391 LRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAP 540
+ + HPDV+ QA+ + +T + K GVN DQT Q AP
Sbjct: 267 IARNHPDVKSQAS---------VSSTASTTGQTVK--GVNADQTQQPTAP 305
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 371 WSAQSRISARRTPTSRNKPPHYTRSCKPP 457
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 9.6
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -1
Query: 226 FFELTIAINCSLIVFWKSWACFSRSCNIVLGASRRTIAP 110
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +1
Query: 322 TQTGKLREVLQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNL 489
T+TGKL L + L++T E + D + Q ++ Q +++ +K+ +++
Sbjct: 134 TETGKLLSGLANDSKVLQQTEEGEDAENDDEDLQKKKERKRAQRSVKTLVKDFESI 189
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 24.6 bits (51), Expect = 9.6
Identities = 17/88 (19%), Positives = 37/88 (42%)
Frame = +3
Query: 216 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKGSAPTSSPELGAHSRGSP 395
+ NT S+++ + V ++ + T + + + S P +P + + S
Sbjct: 31 HKSNTSSIHERENTAAKGPASNVRPARPNVSTSST--SNEVRKSVPVGNPTVHTKTGSSS 88
Query: 396 QGAPRRRETSHRITREAANRHPEHTKGE 479
A + R T + +AAN+ + +GE
Sbjct: 89 SPASKMRNTVNLQHIQAANQKTRNAEGE 116
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 9.6
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 415 EKQATALHEKLQTAIQNTLKE--SQ-NLAKEVGVNMDQTSQKLAPKL 546
EKQ HEK+ ++ LKE SQ N AK++ ++ +Q + K+
Sbjct: 234 EKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILDKM 280
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 24.6 bits (51), Expect = 9.6
Identities = 16/94 (17%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +3
Query: 210 IVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKGSAPTSSPELGAHSRG 389
I+ ++ + NK+L S+++ ++ +G + + AP++ HS+
Sbjct: 169 ILEQEDDDVSNKSLPHAQQSIIRSFPDIQKQPKGFFSYPSSTVSSIAPSTLEAGNLHSQQ 228
Query: 390 SPQGAPRRRETSHRIT-REAANRHPEHTKGEPEP 488
P+ + + IT R+ ++ P +P
Sbjct: 229 PPKFSVDSSVDDNAITPRKPFSKIPNRLSPSTQP 262
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 24.6 bits (51), Expect = 9.6
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Frame = +3
Query: 351 PTSSP--ELGAHSRGSPQG 401
PT SP E AHSR SPQG
Sbjct: 255 PTVSPTNEPSAHSRPSPQG 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,061,040
Number of Sequences: 5004
Number of extensions: 37856
Number of successful extensions: 214
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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