Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M12
         (193 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052078-1|AAK93502.1|  488|Drosophila melanogaster SD03208p pro...    27   4.8  
AE014297-93|AAF52125.2|  488|Drosophila melanogaster CG1074-PA p...    27   4.8  

>AY052078-1|AAK93502.1|  488|Drosophila melanogaster SD03208p
           protein.
          Length = 488

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 192 SVFHQRTNRMKAPRARIRHEGSTLVNFTTNLRYYLIDASTMLVIEYVDIYF-QVNKVQK 19
           ++F    +  K P    R       N+ +   Y+ +DAS  +V+E  + +F Q  KV+K
Sbjct: 68  AMFELYAHSNKLPEFHQRLRNHVTANWHSLAEYFRVDASFKIVVETYNKHFSQREKVEK 126


>AE014297-93|AAF52125.2|  488|Drosophila melanogaster CG1074-PA
           protein.
          Length = 488

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 192 SVFHQRTNRMKAPRARIRHEGSTLVNFTTNLRYYLIDASTMLVIEYVDIYF-QVNKVQK 19
           ++F    +  K P    R       N+ +   Y+ +DAS  +V+E  + +F Q  KV+K
Sbjct: 68  AMFELYAHSNKLPEFHQRLRNHVTANWHSLAEYFRVDASFKIVVETYNKHFSQREKVEK 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,374,056
Number of Sequences: 53049
Number of extensions: 82970
Number of successful extensions: 103
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 24,988,368
effective HSP length: 43
effective length of database: 22,707,261
effective search space used: 454145220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)