Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M12
         (193 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    19   7.1  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    18   9.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    18   9.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   9.4  

>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 139 ARGFDIS*FYNQLE 98
           A+G D+S FY  +E
Sbjct: 201 AKGIDLSDFYLSVE 214


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 111 TTNLRYYLIDASTMLVI 61
           +TN   Y++D    L+I
Sbjct: 197 STNTMVYMVDNKNTLII 213


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 102 LRYYLIDASTML 67
           L+ YLI+AST L
Sbjct: 290 LQTYLINASTYL 301


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 102 LRYYLIDASTML 67
           L+ YLI+AST L
Sbjct: 328 LQTYLINASTYL 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,553
Number of Sequences: 438
Number of extensions: 553
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)