Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M11
(325 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,588... 32 0.090
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 31 0.27
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 1.5
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 28 1.9
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235... 27 2.6
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 27 3.4
09_03_0080 + 12149885-12150842,12150936-12151007,12151129-121513... 27 3.4
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 27 4.5
07_01_0281 - 2067696-2068862 27 4.5
06_03_0736 - 23989881-23990483,23991475-23991489 27 4.5
05_06_0274 - 26860573-26860783,26861125-26861202,26861671-26863157 27 4.5
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 27 4.5
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 27 4.5
01_05_0714 + 24555494-24555637,24555884-24556071,24556195-245562... 27 4.5
07_01_0470 + 3556505-3556588,3557267-3557860 26 5.9
03_06_0638 + 35222994-35223265,35223521-35223610,35224189-352243... 26 5.9
02_02_0281 + 8536494-8536920,8537184-8537338 26 5.9
01_01_1189 + 9454042-9455655 26 5.9
10_01_0358 - 3941313-3941328,3942374-3942693,3942774-3942912,394... 26 7.8
10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-38... 26 7.8
08_02_0237 - 14656476-14656522,14656653-14656764 26 7.8
08_02_0234 - 14600612-14600658,14600775-14600886 26 7.8
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 26 7.8
06_03_0022 - 15536811-15536899,15537485-15537664,15537706-155379... 26 7.8
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638... 26 7.8
02_05_0517 + 29696436-29696741 26 7.8
>03_02_0142 + 5877480-5879663,5879783-5879898,5880749-5882419,
5882570-5882618,5882703-5882941,5883073-5883174,
5883634-5883862
Length = 1529
Score = 32.3 bits (70), Expect = 0.090
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 90 GSSTNEPSDAASASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAANIKQQ 239
G + PSD A++STN NQE K D G + ++ A + ++
Sbjct: 967 GQRASTPSDVATSSTNSQNQETKQGGDSDAGLASSEMVNLDSTGATMSRE 1016
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 30.7 bits (66), Expect = 0.27
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 69 SSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGKLLKDQDEMEFHAANIKQQ 239
SS + SS++ SD +S S ED + A+ K D+ + + QDE KQ+
Sbjct: 597 SSESSDYSSSSDSESDVSSDS-REDRKSARQLKHDELERKKRSQDEKRKELEKQKQE 652
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 28.3 bits (60), Expect = 1.5
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 144 NQEAKSFKCDDCGKLLKDQDEMEFHAANIK 233
++E + C+ CGK+++ + +E H A I+
Sbjct: 484 DKETQKVSCNYCGKVVRTYNRLEHHLAGIR 513
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 27.9 bits (59), Expect = 1.9
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 159 SFKCDDCGKLLKDQDEMEFHA 221
S +C DCG LL+ +E + HA
Sbjct: 5 SLRCGDCGVLLRSVEEAQAHA 25
>08_02_0499 -
17820615-17822516,17823224-17823373,17823491-17823568,
17823948-17824061,17824145-17824297,17826928-17827071,
17827162-17827516,17828574-17828741,17829522-17829751,
17829916-17830049,17830686-17830749
Length = 1163
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +3
Query: 42 DDPGMQTEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGK 185
D GMQ + S+ N+ + + S E+ A+SF CD K
Sbjct: 662 DKSGMQNQVSAHGTHESCEQNDQTTESHPSVCENAPHAESFTCDSPSK 709
>12_02_0792 - 23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +3
Query: 66 ASSSQAPVGSSTNEPSDAASA-----STNEDNQEAKSFKCDDCGKLLKDQDE 206
ASS +A +E D A+A ST ED++ +KC G L +D E
Sbjct: 966 ASSGRASQKDKPSEDVDGATAAQSKPSTGEDDRSKICYKCKKSGHLSRDCPE 1017
>09_03_0080 +
12149885-12150842,12150936-12151007,12151129-12151346,
12153607-12153830,12154004-12154592
Length = 686
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = +3
Query: 15 LHEGLLAHADDPGMQTEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGKLLK 194
L + + AH DD ++ SSS A V SS SD + + + K
Sbjct: 52 LRQFVEAHKDDDDIERSPSSSYAIVSSSPPHRSDVNHMKSEASTSVTVTINTSQASSVQK 111
Query: 195 DQDEMEF 215
+Q F
Sbjct: 112 EQSVTAF 118
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 144 NQEAKSFKCDDCGKLLKDQDEMEFHAANIKQQ 239
+Q+AK FKC C K L M H + ++
Sbjct: 29 HQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKE 60
>07_01_0281 - 2067696-2068862
Length = 388
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 21 EGLLAHADDPGMQTEASSSQAPVGSSTNEPSDAASAST 134
+G+ D P + +SSS GS T++ AA+AS+
Sbjct: 250 KGVSYAGDKPASSSSSSSSAGQQGSDTDKTPSAAAASS 287
>06_03_0736 - 23989881-23990483,23991475-23991489
Length = 205
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 42 DDPGMQTEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGK 185
DD E APV + E ++AA+A+ E+ + + + D C K
Sbjct: 152 DDDDQAHEDVVVAAPVAAEHQETAEAAAAAAGEEEEAPEDKEEDACEK 199
>05_06_0274 - 26860573-26860783,26861125-26861202,26861671-26863157
Length = 591
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 30 LAHADDPGMQTEASSSQAPVGSSTNEPSDAASA 128
+A A+ P QT + S++PV S E + ASA
Sbjct: 343 IAAAETPAEQTRSEVSESPVASPALETTSYASA 375
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +3
Query: 66 ASSSQAPVGSSTNEP---SDAASASTNEDNQEAKSFKCDDCGKL 188
ASSS+ P S SD S S+ N+ KC CGKL
Sbjct: 124 ASSSRQPHRSRRERDGNGSDGKSGSSQAANRNVSKDKCRYCGKL 167
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 36 HADDPGMQTEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGKLLKDQDEMEF 215
H++D M+TE + QA EPS +A + S +D + + DE +F
Sbjct: 1276 HSEDTAMETETTEEQAKGKKGRKEPSKRGAAKKAISSLAVISDDEEDETVPIDEDDEDDF 1335
>01_05_0714 +
24555494-24555637,24555884-24556071,24556195-24556280,
24556359-24556461,24556798-24557000,24557077-24557681,
24557784-24557918,24558040-24558067,24559517-24559596,
24559873-24559975,24560553-24560635,24560915-24561017,
24561596-24561720,24562001-24562103,24562647-24562726,
24563322-24563429,24563521-24563565
Length = 773
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/71 (19%), Positives = 33/71 (46%)
Frame = +3
Query: 24 GLLAHADDPGMQTEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGKLLKDQD 203
GL+ + M+T + S ++P +E + +T+E E D +L+K++
Sbjct: 374 GLMINEGSTAMETPSPSIKSPEHVLESESNPPDGVTTDEQPTENSPIGVDRDSELVKEKG 433
Query: 204 EMEFHAANIKQ 236
H+ ++++
Sbjct: 434 TSSRHSVSLEE 444
>07_01_0470 + 3556505-3556588,3557267-3557860
Length = 225
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 102 NEPSDAASASTNEDNQEAKSFKCDDCGKLLKDQ 200
NE D AS STN D +A + K C K K++
Sbjct: 86 NEEGDDASKSTNLDLSQASAKKRPICRKQAKEK 118
>03_06_0638 +
35222994-35223265,35223521-35223610,35224189-35224349,
35224701-35224770,35224871-35224925,35225413-35225496,
35225960-35225998,35226503-35226549,35226723-35226834
Length = 309
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 51 GMQTEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGKLLKD 197
G+ T S P+G+STN+ + AS D C GKL KD
Sbjct: 106 GLSTNGRSCIGPMGNSTNQGLEIASPVILVDGYNV----CGYWGKLKKD 150
>02_02_0281 + 8536494-8536920,8537184-8537338
Length = 193
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 48 PGMQTEASSSQA--PVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGKLLKDQDEMEFH 218
P +QTE +S P + TN+ +D + E +++C C L+ + + H
Sbjct: 47 PAVQTELETSPVANPNPAETNQYTDGVTYGDLETTDPGTTYRCKRCRTLVATEGYVVTH 105
>01_01_1189 + 9454042-9455655
Length = 537
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 27 LLAHADDPGMQTEASSSQAPVGSSTNEPSDAASAS 131
LL+HA++ +A G ++ PSD+ASAS
Sbjct: 229 LLSHANEALRSVDADGEDG-AGDGSSHPSDSASAS 262
>10_01_0358 -
3941313-3941328,3942374-3942693,3942774-3942912,
3943441-3943543,3944745-3944890,3944941-3945314,
3946416-3946512,3947118-3947566
Length = 547
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 57 QTEASSSQAPVGSSTNEPSD--AASASTNEDNQEAKSFKCDDCGKLLKDQDEMEFH 218
++ ++SS +PV + + A + + + SF C CGK Q M H
Sbjct: 7 RSSSASSTSPVAGKKEKTATKPAGGGARDPPKGRSSSFACRVCGKRFPSQQAMAGH 62
>10_01_0030 - 386008-388056,388166-388360,388931-389062,389167-389538,
389753-389894,392274-392533,392737-393015,394796-394939
Length = 1190
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 222 LHETPFHPGLLTAFHNHHI 166
+H P+ P L FHNHH+
Sbjct: 983 IHAAPY-PSTLMGFHNHHM 1000
>08_02_0237 - 14656476-14656522,14656653-14656764
Length = 52
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 49 GSSACANNPSCKNSC 5
G S CANNP+ + SC
Sbjct: 30 GPSTCANNPAFQQSC 44
>08_02_0234 - 14600612-14600658,14600775-14600886
Length = 52
Score = 25.8 bits (54), Expect = 7.8
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -1
Query: 49 GSSACANNPSCKNSC 5
G S+C+NNP+ ++SC
Sbjct: 30 GPSSCSNNPAVQHSC 44
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 60 TEASSSQAPVGSSTNEPSDAASASTNEDNQEA 155
T +SSS + SSTN P+ A++S++ + A
Sbjct: 42 TTSSSSSSSSSSSTNSPTATAASSSSTNTSGA 73
>06_03_0022 -
15536811-15536899,15537485-15537664,15537706-15537982,
15538680-15538883,15539431-15539496,15539933-15539953,
15541622-15541731,15543244-15544236,15544928-15544955,
15545035-15545093,15545177-15545204,15545453-15545475,
15545784-15545853,15546980-15547033,15547127-15547169,
15548126-15548175
Length = 764
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 60 TEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFK 167
+ A Q P+ S + PS +AST E ++FK
Sbjct: 424 SNAGHQQQPIHSMKSSPSSGLTASTEVHELENETFK 459
>04_04_1268 -
32262994-32263017,32263411-32263488,32263653-32263800,
32263890-32264127,32264210-32264420,32264499-32264680,
32264765-32264866,32265009-32266317,32266906-32266988,
32267436-32267559
Length = 832
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 109 GSFVLLPTGA*ELEASVCIPGSSACANNPSCKN 11
GS VLL T S +PG S+C P KN
Sbjct: 48 GSLVLLVTVVLFWPGSFAVPGKSSCLACPKKKN 80
>02_05_0517 + 29696436-29696741
Length = 101
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 24 GLLAHADDPGMQTEASSSQAPVGSSTNEPSDAASASTNEDNQEAKSFKCDDCGK 185
G L DP + +S AP + EP+ AA+A E E K + ++ G+
Sbjct: 45 GALTRNTDPARDPDEENSAAPADRAVEEPA-AAAAPVEEG--EGKGVELEEKGE 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,939,896
Number of Sequences: 37544
Number of extensions: 147886
Number of successful extensions: 625
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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