BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M08
(291 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 21 7.1
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 21 9.4
AY994090-1|AAX86003.1| 85|Anopheles gambiae hyp6.2 precursor p... 21 9.4
AY344840-1|AAR05811.1| 221|Anopheles gambiae TEP4 protein. 21 9.4
AY344839-1|AAR05810.1| 221|Anopheles gambiae TEP4 protein. 21 9.4
AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein. 21 9.4
AY344837-1|AAR05808.1| 221|Anopheles gambiae TEP4 protein. 21 9.4
AY344836-1|AAR05807.1| 221|Anopheles gambiae TEP4 protein. 21 9.4
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 21 9.4
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 21.4 bits (43), Expect = 7.1
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 170 SYSSPNLFENIEKRSFPK 223
S +SP+ FEN+ + +P+
Sbjct: 86 SVASPSSFENVTSKWYPE 103
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 282 ATIPETSKCSCMIESPLPSHL 220
A IPE K SC +S P H+
Sbjct: 180 AGIPEGGKDSCQGDSGGPMHV 200
>AY994090-1|AAX86003.1| 85|Anopheles gambiae hyp6.2 precursor
protein.
Length = 85
Score = 21.0 bits (42), Expect = 9.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1
Query: 259 FGSFWNSG 282
FG FWN+G
Sbjct: 59 FGQFWNTG 66
>AY344840-1|AAR05811.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 267 FLE*WLWK 290
FLE WLWK
Sbjct: 122 FLESWLWK 129
>AY344839-1|AAR05810.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 267 FLE*WLWK 290
FLE WLWK
Sbjct: 122 FLESWLWK 129
>AY344838-1|AAR05809.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 267 FLE*WLWK 290
FLE WLWK
Sbjct: 122 FLESWLWK 129
>AY344837-1|AAR05808.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 267 FLE*WLWK 290
FLE WLWK
Sbjct: 122 FLESWLWK 129
>AY344836-1|AAR05807.1| 221|Anopheles gambiae TEP4 protein.
Length = 221
Score = 21.0 bits (42), Expect = 9.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 267 FLE*WLWK 290
FLE WLWK
Sbjct: 122 FLESWLWK 129
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 21.0 bits (42), Expect = 9.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 183 GDE*LRINTLFSLQVIDSLNRPPF 112
G++ L++ LQVI+S N P F
Sbjct: 160 GEDLLQLIQSVQLQVINSGNEPTF 183
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,515
Number of Sequences: 2352
Number of extensions: 4467
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 17819379
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -