Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M08
         (291 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB007857-1|BAA23693.3| 1016|Homo sapiens KIAA0397 protein protein.     29   3.6  
BC047022-1|AAH47022.1|  358|Homo sapiens MON1A protein protein.        28   4.7  
BC009459-1|AAH09459.1|  555|Homo sapiens MON1 homolog A (yeast) ...    28   4.7  
BC006299-1|AAH06299.1|  555|Homo sapiens MON1 homolog A (yeast) ...    28   4.7  
AK092018-1|BAC03790.1|  298|Homo sapiens protein ( Homo sapiens ...    28   4.7  
AL049759-1|CAI23393.1|  852|Homo sapiens protein ( Human DNA seq...    27   8.3  
AB275761-1|BAF63511.1| 1093|Homo sapiens small G protein signali...    27   8.3  
AB075821-1|BAB85527.1| 1233|Homo sapiens KIAA1941 protein protein.     27   8.3  

>AB007857-1|BAA23693.3| 1016|Homo sapiens KIAA0397 protein protein.
          Length = 1016

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
 Frame = +2

Query: 92  RPSISIKKGGLFNESITCNENNVLIRSYSSPNLFENIEK-RSFPKCEGRGLSIMQEHLEV 268
           RP +   +GG     ++C EN +L R    P L+    K + FPK   R  SI    +E 
Sbjct: 359 RPPLHFPQGGHLLSFLSCLENGLLPRGQLEPPLWTQQGKGKVFPKLRKRS-SIRSVDMEE 417

Query: 269 SG 274
            G
Sbjct: 418 MG 419


>BC047022-1|AAH47022.1|  358|Homo sapiens MON1A protein protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 8/26 (30%), Positives = 20/26 (76%)
 Frame = -2

Query: 218 EKIVFLYFQISSVMNNSELTHYFHYK 141
           ++++++Y+QI S++  ++L+H F  K
Sbjct: 37  QELLYIYYQILSLLTGAQLSHIFQQK 62


>BC009459-1|AAH09459.1|  555|Homo sapiens MON1 homolog A (yeast)
           protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 8/26 (30%), Positives = 20/26 (76%)
 Frame = -2

Query: 218 EKIVFLYFQISSVMNNSELTHYFHYK 141
           ++++++Y+QI S++  ++L+H F  K
Sbjct: 234 QELLYIYYQILSLLTGAQLSHIFQQK 259


>BC006299-1|AAH06299.1|  555|Homo sapiens MON1 homolog A (yeast)
           protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 8/26 (30%), Positives = 20/26 (76%)
 Frame = -2

Query: 218 EKIVFLYFQISSVMNNSELTHYFHYK 141
           ++++++Y+QI S++  ++L+H F  K
Sbjct: 234 QELLYIYYQILSLLTGAQLSHIFQQK 259


>AK092018-1|BAC03790.1|  298|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34699 fis, clone MESAN2002186. ).
          Length = 298

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 8/26 (30%), Positives = 20/26 (76%)
 Frame = -2

Query: 218 EKIVFLYFQISSVMNNSELTHYFHYK 141
           ++++++Y+QI S++  ++L+H F  K
Sbjct: 72  QELLYIYYQILSLLTGAQLSHIFQQK 97


>AL049759-1|CAI23393.1|  852|Homo sapiens protein ( Human DNA
           sequence from clone RP5-930L11 on chromosome
           22q11.21-11.23.  ).
          Length = 852

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 92  RPSISIKKGGLFNESITCNENNVLIRSYSSPNLFENIEK-RSFPKCEGR 235
           RP     KGG   + ++C EN +L      P L+    K + FPK   R
Sbjct: 326 RPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKR 374


>AB275761-1|BAF63511.1| 1093|Homo sapiens small G protein signaling
           modulator 1 protein protein.
          Length = 1093

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 92  RPSISIKKGGLFNESITCNENNVLIRSYSSPNLFENIEK-RSFPKCEGR 235
           RP     KGG   + ++C EN +L      P L+    K + FPK   R
Sbjct: 348 RPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKR 396


>AB075821-1|BAB85527.1| 1233|Homo sapiens KIAA1941 protein protein.
          Length = 1233

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 92  RPSISIKKGGLFNESITCNENNVLIRSYSSPNLFENIEK-RSFPKCEGR 235
           RP     KGG   + ++C EN +L      P L+    K + FPK   R
Sbjct: 549 RPPFRFPKGGHLLQFLSCLENGLLPHGQLDPPLWSQRGKGKVFPKLRKR 597


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,348,049
Number of Sequences: 237096
Number of extensions: 569604
Number of successful extensions: 753
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)