Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M07
(334 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 216 5e-59
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 212 8e-58
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 212 8e-58
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 69 1e-14
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 1.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.2
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 3.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 5.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 5.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 5.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 6.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 6.8
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 6.8
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 6.8
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 20 6.8
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 20 6.8
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 20 9.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 216 bits (528), Expect = 5e-59
Identities = 100/109 (91%), Positives = 105/109 (96%)
Frame = +2
Query: 8 EEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTP 187
+EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIVLNHPGQISNGYTP
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTP 359
Query: 188 VLDCHFAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 334
VLDCH AHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPSK
Sbjct: 360 VLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSK 408
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 212 bits (518), Expect = 8e-58
Identities = 98/108 (90%), Positives = 103/108 (95%)
Frame = +2
Query: 11 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 190
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPV
Sbjct: 301 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPV 360
Query: 191 LDCHFAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 334
LDCH AHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 361 LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 408
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 212 bits (518), Expect = 8e-58
Identities = 98/108 (90%), Positives = 103/108 (95%)
Frame = +2
Query: 11 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPV 190
EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNHPGQISNGYTPV
Sbjct: 12 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPV 71
Query: 191 LDCHFAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSK 334
LDCH AHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+K
Sbjct: 72 LDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 68.9 bits (161), Expect = 1e-14
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 8 EEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 103
+EAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 1.3
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 115 GSCRLHSASHCAKSPRSNIKRIHTCIGLPLCPHSLQICRNQRESR 249
G LHSA S SN+ + T + L P +Q + ++S+
Sbjct: 938 GHSVLHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 2.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 56 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 163
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 243 KSTVVLVNQQRTTLNPLNLVM 305
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 3.0
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +3
Query: 27 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 149
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 3.0
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +1
Query: 100 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPLCP 210
K TQ S + + + P S +R HT G+P P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 5.2
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 243 KSTVVLVNQQRTTLNPLNLVM 305
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 5.2
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 243 KSTVVLVNQQRTTLNPLNLVM 305
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 5.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 103 QPTQGSCRLHSASHCAKSPRS 165
Q TQ LH S A+SP S
Sbjct: 665 QHTQSQLHLHLTSPPARSPSS 685
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 6.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 236 KEKVDRRTGKSTEDNPKSIKS 298
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 6.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 236 KEKVDRRTGKSTEDNPKSIKS 298
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 6.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 267 QQRTTLNPLNLVMPPLSTW 323
+ RT L+P N +P + W
Sbjct: 380 KSRTNLDPSNRKLPAPANW 398
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.8
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 243 KSTVVLVNQQRTTLNPLNLVM 305
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.2 bits (40), Expect = 6.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 259 STTVDFLFDFGKFAGYVGKVAIQYRCVS 176
ST+ + F K GY G+ + CV+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVT 104
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 20.2 bits (40), Expect = 6.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 259 STTVDFLFDFGKFAGYVGKVAIQYRCVS 176
ST+ + F K GY G+ + CV+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVT 104
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 19.8 bits (39), Expect = 9.1
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 148 HNDLRCEVCSSPGWVVFRI 92
HND+ CE G RI
Sbjct: 158 HNDIYCEKYEKNGETYLRI 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,011
Number of Sequences: 438
Number of extensions: 2158
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7466580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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