Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M06
         (243 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   0.94 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   2.2  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   2.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   2.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    20   5.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              20   5.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              19   6.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   6.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    19   8.8  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 0.94
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 243 SPLYPEAGPAKMSLSV 196
           SPL P A P+K  LSV
Sbjct: 694 SPLEPSAVPSKFCLSV 709


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.0 bits (42), Expect = 2.2
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -3

Query: 193 SVILPPRKSSRNSLTAD 143
           ++I+PP+KS  +++ +D
Sbjct: 427 NMIIPPKKSDMSNMQSD 443


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 147 AVNEFLDDLRGGRMTEAPIVTF*QGQLQGKVV 242
           AVNEF+  L+ G +    + T    +++ + V
Sbjct: 76  AVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAV 107


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 2.9
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 147 AVNEFLDDLRGGRMTEAPIVTF*QGQLQGKVV 242
           AVNEF+  L+ G +    + T    +++ + V
Sbjct: 76  AVNEFMQLLKHGMLPRGQVFTMMNKEMRHQAV 107


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 231 PEAGPAKMSLSV 196
           PEA PA+++L V
Sbjct: 270 PEAAPARVTLGV 281


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.8 bits (39), Expect = 5.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 203 YRCLGHSATSQVI*ELINCRYHD 135
           +R   HS +S     L+ C +HD
Sbjct: 132 HRAACHSGSSLTKSRLMRCLHHD 154


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -2

Query: 239 HFTLKLALLKCHYRCLGHSATSQ-VI*ELIN 150
           H  LK  +      C+G + TSQ +I E+ N
Sbjct: 19  HEELKTGIQTLQPICVGETGTSQKIIDEVYN 49


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 211 NVTIGASVILPPRK 170
           NVT   + ILPP K
Sbjct: 958 NVTTNLTTILPPVK 971


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -2

Query: 218 LLKCHYRCLGHSATSQVI*ELINCRYH 138
           LL  ++ C+     S V+  ++   YH
Sbjct: 293 LLGTYFNCIMFMVASSVVSTILILNYH 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,449
Number of Sequences: 438
Number of extensions: 681
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)