Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M05
         (248 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   0.31 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   0.95 
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        21   6.7  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    21   6.7  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    21   8.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 239 VRGSHSRPFRKKRASCLLAISP 174
           V+G+H  PFR    S +LA++P
Sbjct: 833 VKGAHGGPFRVVALSGILAVTP 854


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 224 SRPFRKKRASCLLAISPAHCHLSLPILRA 138
           SRP         +AISP +C  S+P L++
Sbjct: 789 SRPSSASSNQSRVAISPLYCEGSVPTLQS 817



 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 132  GYFGSSADLRIPDSITQ 82
            G    +A  RIPDSIT+
Sbjct: 994  GSSSGTATTRIPDSITR 1010


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 154 KLKWQWAGEIASRHDARFFRKGLE 225
           K KW+   E     DA FF  GL+
Sbjct: 280 KAKWKTQFEPLVTRDAPFFPDGLD 303


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/32 (25%), Positives = 19/32 (59%)
 Frame = -1

Query: 143 RAMSVTLVLLRISAFLIRSRSETPSIALHCPL 48
           R ++  ++ L ++ +L+    + P+I+ H PL
Sbjct: 274 RIITNGILALMVTIYLVYFAQQLPAISGHTPL 305


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 110 ISAFLIRSRSETPSIALHCPLSFLTRPIVSDYV 12
           + AF     ++TP   +  P SF+  P   +Y+
Sbjct: 472 VRAFRFLPTAQTPDRIVFDPKSFILSPAGGNYL 504


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,811
Number of Sequences: 2352
Number of extensions: 4528
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12740367
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)