Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M05
         (248 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin ...    27   4.6  
AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p pro...    26   6.1  
AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA...    26   6.1  
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD...    26   6.1  

>L23146-1|AAA03750.1| 1011|Drosophila melanogaster neuromusculin
           protein.
          Length = 1011

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 157 LKWQWAGEIASRHDARFFRKGLEWLP 234
           + WQ  G    R+D+R+F K   W+P
Sbjct: 700 ISWQKDGVPIERNDSRYFIKENTWMP 725


>AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p
           protein.
          Length = 767

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 170 HCHLSLPILRAMSVTLVLLRISAFLI 93
           H H SL  LR +S+++V  RI AF++
Sbjct: 325 HDHSSLCALRKVSLSMVKARIYAFIV 350


>AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA
           protein.
          Length = 767

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 170 HCHLSLPILRAMSVTLVLLRISAFLI 93
           H H SL  LR +S+++V  RI AF++
Sbjct: 325 HDHSSLCALRKVSLSMVKARIYAFIV 350


>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
            protein.
          Length = 2351

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -3

Query: 192  SASNLPSPLPLKFTNSSGNVGYFGSSADLRIPDSITQ*NSKHSPPLP 52
            S S+ PSP P+KF  +SG      ++  +  P S T+      PP P
Sbjct: 1022 STSSFPSPSPVKFQPTSGT-----TATTVGTPSSATKSPLAPPPPSP 1063


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,684,261
Number of Sequences: 53049
Number of extensions: 212937
Number of successful extensions: 481
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 24,988,368
effective HSP length: 62
effective length of database: 21,699,330
effective search space used: 433986600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)