Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_M04
(389 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 170 3e-43
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 170 4e-43
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 169 9e-43
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 168 1e-42
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 168 2e-42
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 165 1e-41
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 163 4e-41
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 161 1e-40
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 154 2e-38
12_02_1282 + 27528159-27529148,27529549-27529614 97 6e-21
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 73 1e-13
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 71 2e-13
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 71 4e-13
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 60 8e-10
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 59 1e-09
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 58 2e-09
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 52 2e-07
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 46 1e-05
04_01_0401 - 5260308-5260361,5260457-5260507,5260764-5260809,526... 30 0.57
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 29 0.99
04_04_1330 - 32700333-32700770 28 2.3
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 28 3.0
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 28 3.0
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504... 27 4.0
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 5.3
12_01_0255 + 1888193-1888914,1890247-1890460,1890535-1890615,189... 27 7.0
11_01_0257 + 1972111-1972832,1974214-1974427,1974502-1974582,197... 27 7.0
03_02_0139 - 5844107-5844278,5844413-5844521,5844630-5844732,584... 27 7.0
07_03_1290 + 25537973-25538962 26 9.2
02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113 26 9.2
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 170 bits (414), Expect = 3e-43
Identities = 78/89 (87%), Positives = 82/89 (92%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVW GGSIL
Sbjct: 289 VDIRKDLYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWISK EYDESGP IVHRKCF
Sbjct: 349 ASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 170 bits (413), Expect = 4e-43
Identities = 78/89 (87%), Positives = 82/89 (92%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVW GGSIL
Sbjct: 289 VDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWISK EYDESGP IVHRKCF
Sbjct: 349 ASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 169 bits (410), Expect = 9e-43
Identities = 78/89 (87%), Positives = 82/89 (92%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVW GGSIL
Sbjct: 286 VDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 345
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWISK EYDESGP IVHRKCF
Sbjct: 346 ASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 168 bits (409), Expect = 1e-42
Identities = 77/89 (86%), Positives = 82/89 (92%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVW GGSIL
Sbjct: 292 VDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 351
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWISK EYDESGP IVHRKCF
Sbjct: 352 ASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 168 bits (408), Expect = 2e-42
Identities = 77/89 (86%), Positives = 82/89 (92%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVW GGSIL
Sbjct: 289 VDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWI+K EYDESGP IVHRKCF
Sbjct: 349 ASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 165 bits (401), Expect = 1e-41
Identities = 75/89 (84%), Positives = 82/89 (92%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVW GGSIL
Sbjct: 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWIS+ EY+ESGP IVHRKCF
Sbjct: 349 ASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 163 bits (396), Expect = 4e-41
Identities = 75/89 (84%), Positives = 81/89 (91%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGG+TM+PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVW GGSIL
Sbjct: 288 VDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSIL 347
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWISK EYDESGP IVH KCF
Sbjct: 348 ASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 161 bits (392), Expect = 1e-40
Identities = 74/89 (83%), Positives = 79/89 (88%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGG+TM+PGI DRM KEITALAP +MKIK++APPERKYSVW GGSIL
Sbjct: 288 VDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSIL 347
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
ASLSTF QMWISK EYDESGP IVH KCF
Sbjct: 348 ASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 154 bits (374), Expect = 2e-38
Identities = 77/103 (74%), Positives = 83/103 (80%), Gaps = 14/103 (13%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVW GGSIL
Sbjct: 289 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSIL 348
Query: 192 ASLSTF--------------LQMWISKQEYDESGPLIVHRKCF 278
ASLSTF +QMWISK EYDESGP IVHRKCF
Sbjct: 349 ASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 96.7 bits (230), Expect = 6e-21
Identities = 55/89 (61%), Positives = 58/89 (65%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSIL 191
VDIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK
Sbjct: 289 VDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK------------------ 330
Query: 192 ASLSTFLQMWISKQEYDESGPLIVHRKCF 278
MWI+K EYDESGP IVHRKCF
Sbjct: 331 --------MWIAKAEYDESGPSIVHRKCF 351
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 72.5 bits (170), Expect = 1e-13
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWSGG 182
VDIRK+L ++ +LSGG++ + +R++KE+ + ++K++A ER++SVW GG
Sbjct: 392 VDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGG 451
Query: 183 SILASLSTFLQMWISKQE 236
SILASL +F QMW SK +
Sbjct: 452 SILASLGSFQQMWFSKAD 469
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 71.3 bits (167), Expect = 2e-13
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Frame = +3
Query: 15 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWS 176
+ + L NT+L GGT G DR Q+E L+ S + ++ PPE +YS W
Sbjct: 306 EYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWL 364
Query: 177 GGSILASLSTFLQMWISKQEYDESGPLIVHRKCF 278
GG+ILA + ++K +YDE+GP IVH+KCF
Sbjct: 365 GGAILAKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 70.5 bits (165), Expect = 4e-13
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +3
Query: 30 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSILASLSTF 209
L+ +L+GG+T++P +R++KE+ L P ++KIIA + W GGS+LA F
Sbjct: 346 LFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDF 405
Query: 210 LQMWISKQEYDESGPLIVHRKCF 278
M I+K EY+E G + R+ F
Sbjct: 406 ESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 59.7 bits (138), Expect = 8e-10
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP--------------STMKIKIIAP 149
+D R+DLY N VLSGG+TM+ R+Q +I + +++ ++A
Sbjct: 333 IDTRRDLYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAH 392
Query: 150 PERKYSVWSGGSILASLSTFLQMWISKQEYDESGPLI 260
P + Y+ W GGS+ AS F + +K+EY+E G I
Sbjct: 393 PIQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASI 429
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 58.8 bits (136), Expect = 1e-09
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Frame = +3
Query: 33 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWSGGSILASLST 206
Y VLSGG++ PG+++R++KE+ L P+ + I++I PP S W G +++++ST
Sbjct: 398 YKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVST 457
Query: 207 FLQMWISKQE 236
F + W K++
Sbjct: 458 FTEAWCIKKK 467
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 58.0 bits (134), Expect = 2e-09
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKII 143
+D R+ LY N VLSGG+TM+ R+Q+++ + + + ++ ++
Sbjct: 364 IDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVV 423
Query: 144 APPERKYSVWSGGSILASLSTFLQMWISKQEYDESGPLI 260
+ P ++Y+VW GGS+LAS + F + +K EY+E G I
Sbjct: 424 SHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 51.6 bits (118), Expect = 2e-07
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 11/74 (14%)
Frame = +3
Query: 12 VDIRKDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPER 158
+D R LY + VLSGG+TMYPG+ R++KE+ L + ++++I PP R
Sbjct: 317 IDNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRR 376
Query: 159 KYSVWSGGSILASL 200
K+ V+ GG++LA +
Sbjct: 377 KHMVYLGGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 45.6 bits (103), Expect = 1e-05
Identities = 21/85 (24%), Positives = 42/85 (49%)
Frame = +3
Query: 18 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSILAS 197
+++ L + +++GG ++ PG+ R++ I P +K++ + W G + A+
Sbjct: 618 VKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAA 677
Query: 198 LSTFLQMWISKQEYDESGPLIVHRK 272
S F + S +Y E G + HRK
Sbjct: 678 SSKFGRHTFSLADYREHGENLFHRK 702
>04_01_0401 -
5260308-5260361,5260457-5260507,5260764-5260809,
5260884-5260933,5261019-5261062,5261231-5261310,
5261391-5261461,5261636-5261725,5262367-5262498,
5263420-5263470,5263615-5263704,5263841-5263878,
5265882-5266002,5267653-5267960,5268742-5268820,
5270019-5270113,5270288-5270428,5270792-5270831
Length = 526
Score = 30.3 bits (65), Expect = 0.57
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +3
Query: 9 RVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI-KIIAPPERKYSV---WS 176
R+++++ L+ + L GGT G+A +++ + PS I K R Y + W
Sbjct: 447 RIELQRKLFCSIQLVGGTASTAGLAPVLEQRVLNTIPSNQPIEKAEVLQSRSYPLFVPWK 506
Query: 177 GG 182
GG
Sbjct: 507 GG 508
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 29.5 bits (63), Expect = 0.99
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 66 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSGGSILAS 197
MYP D +K+ L K APPER+++ S+L S
Sbjct: 255 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYS 298
>04_04_1330 - 32700333-32700770
Length = 145
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 304 QQPAVRSISRPAAQLRLVISITLLV 378
++PA R++S P A+LR + S++LLV
Sbjct: 116 RRPAARNVSPPQAKLRCLRSLSLLV 140
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 141 IAPPERKYSVWSGGSILASLSTFLQMWISKQEYDESGP 254
+ PP ++ V S GS+L L+ +L+ K D GP
Sbjct: 325 VVPPGFRFVVTSDGSVLEKLNPYLESGKVKPLVDPKGP 362
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 66 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 167
MYP D +K+ L K APPER+++
Sbjct: 350 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383
>03_02_0020 -
5045900-5046211,5046233-5046290,5046604-5047242,
5048475-5048515,5048672-5048728,5048952-5049140
Length = 431
Score = 27.5 bits (58), Expect = 4.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 77 YCRPYAEGNHSPRSIHDEDQNHRATREEVFCMERWIDPRLPLYLPADVDLE 229
YC + H H E + H+ + ++ + ID + L LPA VD+E
Sbjct: 378 YCVLNSPHVHKDSRFHFEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVE 428
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.1 bits (57), Expect = 5.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 38 QHSIVWWYHH 67
QH I+WW HH
Sbjct: 2783 QHQIIWWIHH 2792
>12_01_0255 +
1888193-1888914,1890247-1890460,1890535-1890615,
1890753-1890842,1890950-1891036,1891553-1891653,
1891966-1892011,1892366-1892440,1892557-1892640,
1892721-1892936,1893216-1893358,1893488-1893629
Length = 666
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 271 SASKRCAHRCLQQPAVRSISRP 336
SAS+RC HR +P S+++P
Sbjct: 54 SASRRCYHRAFARPVRASMAQP 75
>11_01_0257 +
1972111-1972832,1974214-1974427,1974502-1974582,
1974720-1974809,1974911-1974997,1975484-1975584,
1975892-1975937,1976272-1976346,1976459-1976542,
1976620-1976861,1977067-1977258,1977391-1977532
Length = 691
Score = 26.6 bits (56), Expect = 7.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 271 SASKRCAHRCLQQPAVRSISRP 336
SAS+RC HR +P S+++P
Sbjct: 54 SASRRCYHRAFARPVRASMAQP 75
>03_02_0139 -
5844107-5844278,5844413-5844521,5844630-5844732,
5844834-5844865,5845211-5845434,5845774-5845889,
5845997-5846252,5846720-5846807,5846891-5846962,
5847096-5847171,5847302-5847360,5848202-5848268,
5848760-5848825,5850466-5850657
Length = 543
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 317 TAGCWRQRCAQRLEALPVHNQGAGLVIFLFRDPHLQEGR 201
TA QRC+ + LP+H A + +F + ++GR
Sbjct: 58 TASAAYQRCSVAPDELPIHTAKAVIEVFEYEGAVKEDGR 96
>07_03_1290 + 25537973-25538962
Length = 329
Score = 26.2 bits (55), Expect = 9.2
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Frame = +2
Query: 59 YHHVPWYCRPYAEGNHSP-RSIHDEDQNHRATR--------EEVFCMERWIDPRLPLYLP 211
+HH+P YC ++ SP R+ + + A + F + P+
Sbjct: 22 HHHLPSYCYFFSSAPTSPTRASYSGEAAAAAVGVGEGDGAFDFAFGFSGQLRESTPILAA 81
Query: 212 ADVDLETGI*RVRPLDCAQEVLLSAVRIAASSSPR 316
AD E G R+RPL+ +L V +A +SPR
Sbjct: 82 ADELFEGG--RIRPLNTPHPSILQLVDDSAYASPR 114
>02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113
Length = 728
Score = 26.2 bits (55), Expect = 9.2
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 6 TRVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWSG 179
T + K L+ TVLS P IA + + AP +K ++AP + WSG
Sbjct: 455 TPYPVGKILFFGTVLSSS----PRIASFSARGPSLAAPEILKPDLVAPGVSILAAWSG 508
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,312,798
Number of Sequences: 37544
Number of extensions: 278587
Number of successful extensions: 923
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -