Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_M02
         (188 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   0.33 
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   1.8  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    20   3.1  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    20   3.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    19   4.1  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    19   7.2  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    19   7.2  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.0 bits (47), Expect = 0.33
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 85  FRLRIWNIDF*KKVLAPWMTDSFHLV 162
           F L  +  D   K   PW TDS+ L+
Sbjct: 111 FSLLYYEFDVATKEPPPWETDSYKLI 136



 Score = 19.4 bits (38), Expect = 4.1
 Identities = 5/23 (21%), Positives = 13/23 (56%)
 Frame = +3

Query: 18  RLYVEWSVPKTGLLKKFATVNSI 86
           ++ V W+ P+    +KF + + +
Sbjct: 799 KIPVRWTAPEAIAFRKFTSASDV 821


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = +1

Query: 139 MTDSFHLVEYSVAYAW 186
           + D  HL EY +   W
Sbjct: 181 LADELHLTEYKLVEKW 196


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 120 KSFSAMDDRFFPF 158
           KSF  +D  +FPF
Sbjct: 142 KSFCEIDVEYFPF 154


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 175 PPNTQLNGKNLSSMALKLFFKSR 107
           PP T   G+N+  M L+  + +R
Sbjct: 45  PPVTPPQGENMLDMDLRGIYSNR 67


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 103 SKYEVEIEFTVANFFNKPVLGTDHSTYSRRLI 8
           ++YE   E  +    N+P  G D S Y  R I
Sbjct: 347 NEYEQPSEEDLKRITNQPSEGEDISDYKFRHI 378


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 120 KSFSAMDDRFFPF 158
           KS   +D R+FPF
Sbjct: 142 KSSCEIDVRYFPF 154


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 10/46 (21%), Positives = 20/46 (43%)
 Frame = +3

Query: 36  SVPKTGLLKKFATVNSISTSYLEYRLLKKSFSAMDDRFFPFS*VFG 173
           +V   GL  ++A + +   ++L    +KK      +  +  S  FG
Sbjct: 37  AVMSEGLGMRYAFLGAFEAAHLNAEGMKKYCETYKNSIYDVSMTFG 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,540
Number of Sequences: 438
Number of extensions: 632
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used:  2558940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)