Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L21
         (209 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071368-1|AAL48990.1|  352|Drosophila melanogaster RE40051p pro...    29   1.2  
AF277392-1|AAG17401.1|  342|Drosophila melanogaster beta-sarcogl...    29   1.2  
AE014297-1516|AAF54808.1|  352|Drosophila melanogaster CG5657-PA...    29   1.2  
BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p pro...    26   6.3  
BT023023-1|AAY55439.1|  332|Drosophila melanogaster IP11069p pro...    26   6.3  
AE014297-3648|AAF56350.1|  343|Drosophila melanogaster CG31119-P...    26   6.3  

>AY071368-1|AAL48990.1|  352|Drosophila melanogaster RE40051p
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 182 HRVPHSTDFWTLWRILMMLNTGNLYLTL 99
           H+  ++  FWT+  +L++L  GNL LTL
Sbjct: 71  HQGRNTFAFWTIVVLLLVLTVGNLLLTL 98


>AF277392-1|AAG17401.1|  342|Drosophila melanogaster
           beta-sarcoglycan-like proteinSCG-BETA protein.
          Length = 342

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 182 HRVPHSTDFWTLWRILMMLNTGNLYLTL 99
           H+  ++  FWT+  +L++L  GNL LTL
Sbjct: 61  HQGRNTFAFWTIVVLLLVLTVGNLLLTL 88


>AE014297-1516|AAF54808.1|  352|Drosophila melanogaster CG5657-PA
           protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -1

Query: 182 HRVPHSTDFWTLWRILMMLNTGNLYLTL 99
           H+  ++  FWT+  +L++L  GNL LTL
Sbjct: 71  HQGRNTFAFWTIVVLLLVLTVGNLLLTL 98


>BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p
           protein.
          Length = 328

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 207 DTLPPFDSSQGSTLH*LLDIMENLDDVEHWE 115
           + L PFD+++G  +H LL     LDD   +E
Sbjct: 33  ERLHPFDAAKGKHIHKLLCAQLQLDDGSFYE 63


>BT023023-1|AAY55439.1|  332|Drosophila melanogaster IP11069p
           protein.
          Length = 332

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 207 DTLPPFDSSQGSTLH*LLDIMENLDDVEHWE 115
           + L PFD+++G  +H LL     LDD   +E
Sbjct: 37  ERLHPFDAAKGKHIHKLLCAQLQLDDGSFYE 67


>AE014297-3648|AAF56350.1|  343|Drosophila melanogaster CG31119-PA
           protein.
          Length = 343

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 207 DTLPPFDSSQGSTLH*LLDIMENLDDVEHWE 115
           + L PFD+++G  +H LL     LDD   +E
Sbjct: 48  ERLHPFDAAKGKHIHKLLCAQLQLDDGSFYE 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,052,046
Number of Sequences: 53049
Number of extensions: 158227
Number of successful extensions: 585
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 24,988,368
effective HSP length: 49
effective length of database: 22,388,967
effective search space used: 447779340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)