Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L21
(209 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 26 3.2
AF025451-10|AAB71207.1| 343|Caenorhabditis elegans Hypothetical... 25 5.6
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF022974-8|AAX22288.1| 289|Caenorhabditis elegans Serpentine re... 25 7.3
Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z29094-15|CAA82341.3| 672|Caenorhabditis elegans Hypothetical p... 25 9.7
U80454-8|ABC71798.1| 623|Caenorhabditis elegans Hypothetical pr... 25 9.7
U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical pr... 25 9.7
U47144-2|AAB52620.1| 235|Caenorhabditis elegans Regulator of g ... 25 9.7
U41531-1|AAR85903.1| 210|Caenorhabditis elegans Hypothetical pr... 25 9.7
U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead trans... 25 9.7
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = -1
Query: 197 HHLTHHRVPHST---DFWTLWRIL 135
HH+ +RV ST D W LW+ L
Sbjct: 927 HHIKQYRVKSSTLRSDLWRLWQTL 950
>AF025451-10|AAB71207.1| 343|Caenorhabditis elegans Hypothetical
protein C24H12.11 protein.
Length = 343
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -3
Query: 195 PFDSSQGSTLH*LLDIMENLDDVEHWELILDFEGVF 88
PF +SQ T H LLDI+ N ++H L +D + +F
Sbjct: 149 PFKTSQELT-H-LLDILNNSFLIDHVNLAIDHDQLF 182
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 43 SQDYKKHIWRHYEYKKDSFKVKYKF 117
+ D++K +WR Y + + K YK+
Sbjct: 286 ASDFEKEVWRQKRYGRKTNKGYYKY 310
>AF022974-8|AAX22288.1| 289|Caenorhabditis elegans Serpentine
receptor, class sx protein10 protein.
Length = 289
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 120 WELILDFEGVFLILVMSPNMFFVILACFDGDEW 22
WE+IL FL L+ N F+V A + DE+
Sbjct: 236 WEIILYVHNSFLTLLSFSNTFYV--AIWQSDEY 266
>Z70683-1|CAA94590.1| 511|Caenorhabditis elegans Hypothetical
protein F13B12.1 protein.
Length = 511
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 20 NHSSPSKQAKITKNIFGD 73
+H SK+ TKN+FGD
Sbjct: 133 DHEGTSKKEPTTKNLFGD 150
>Z29094-15|CAA82341.3| 672|Caenorhabditis elegans Hypothetical
protein C07A9.11 protein.
Length = 672
Score = 24.6 bits (51), Expect = 9.7
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -3
Query: 159 LLDIMENLD---DVEHWELILDFEGVFLILVMSPNMFFVILACFDGDEW 22
L D+ E+LD + E WE + F V + + PN+ F + + W
Sbjct: 399 LKDLAEHLDPRPEAEDWEEMNIFSKVMAYINVVPNLLFKLTIPLNEMSW 447
>U80454-8|ABC71798.1| 623|Caenorhabditis elegans Hypothetical
protein T16A1.1b protein.
Length = 623
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 73 HYEYKKDSFKVKYKFPVFNIIKILHNVQKSVECG 174
++E +K S K KY+F + + LH+ Q++ G
Sbjct: 215 YHEGRKWSIKCKYEFKLISASGNLHSAQQTTVFG 248
>U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical
protein T16A1.1a protein.
Length = 650
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 73 HYEYKKDSFKVKYKFPVFNIIKILHNVQKSVECG 174
++E +K S K KY+F + + LH+ Q++ G
Sbjct: 215 YHEGRKWSIKCKYEFKLISASGNLHSAQQTTVFG 248
>U47144-2|AAB52620.1| 235|Caenorhabditis elegans Regulator of g
protein signalingprotein 9 protein.
Length = 235
Score = 24.6 bits (51), Expect = 9.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 55 CNLGLLRWR*MVPTHCLV 2
C+ G+ RW P HC+V
Sbjct: 23 CSSGVARWNEEFPRHCVV 40
>U41531-1|AAR85903.1| 210|Caenorhabditis elegans Hypothetical
protein T07D1.5 protein.
Length = 210
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 132 DVEHWELILDFEGVFLILVMSPNMFFVILA 43
D+ +W L L+F G + + SP+ ++L+
Sbjct: 91 DLNYWSLPLNFNGTSVPTISSPSYTTMVLS 120
>U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead
transcription factor familyprotein 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +1
Query: 10 NELEPFISIEASQDYKKHIWRHYEYKKDSFK 102
N + IS + + H WR+Y Y +++K
Sbjct: 187 NSPDGMISTTENYSFILHHWRYYRYANENWK 217
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,123,087
Number of Sequences: 27780
Number of extensions: 81691
Number of successful extensions: 266
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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