Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L21
         (209 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   2.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   2.1  
AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.        21   2.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   2.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   2.8  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   3.7  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   3.7  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           19   4.9  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           19   4.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    19   6.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    19   8.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    19   8.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    19   8.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       19   8.5  

>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 2.1
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 114 LILDFEGVFLILVMSP 67
           L+++F G+F ++ +SP
Sbjct: 295 LVINFSGIFNLVKISP 310


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 2.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 123 HWELILDFEG 94
           HW L+  FEG
Sbjct: 211 HWHLVYPFEG 220


>AB178034-1|BAD27112.1|   76|Apis mellifera apiceropsin protein.
          Length = 76

 Score = 20.6 bits (41), Expect = 2.1
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 114 LILDFEGVFLILVMSP 67
           L+++F G+F ++ +SP
Sbjct: 45  LVINFSGIFNLVKISP 60


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 2.8
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -1

Query: 203 HCHHLTHHRV 174
           H HH  HH +
Sbjct: 280 HVHHANHHAI 289


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 2.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 153 PEVSGVWNPVMSQMVAVY 206
           P +SG   PV  Q +A+Y
Sbjct: 392 PPISGSATPVFHQEMALY 409



 Score = 19.0 bits (37), Expect = 6.4
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 52  YKKHIWRHYEYKKDSFK 102
           +K H+W+    KK + K
Sbjct: 422 WKTHVWKKGRDKKSTSK 438


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 144 ENLDDVEHWEL 112
           +  DD  HWEL
Sbjct: 435 QKFDDEAHWEL 445


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 3.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 197 HHLTHHRV 174
           HHL HH+V
Sbjct: 74  HHLHHHQV 81


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 153 PEVSGVWNPVMSQM 194
           PEV+  WN  +  M
Sbjct: 148 PEVAEAWNKTLDMM 161


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 19.4 bits (38), Expect = 4.9
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 153 PEVSGVWNPVMSQM 194
           PEV+  WN  +  M
Sbjct: 148 PEVAEAWNKTLDMM 161


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 19.0 bits (37), Expect = 6.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 16  LEPFISIEASQDYKKHIWR 72
           + PFI    S D++   WR
Sbjct: 354 INPFIYAFYSADFRLAFWR 372


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 79  EYKKDSFKVKYKFPVFNIIKILHNVQKSVE 168
           E+K  + +  Y   V N+I I  +++ S E
Sbjct: 518 EWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 547


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 79  EYKKDSFKVKYKFPVFNIIKILHNVQKSVE 168
           E+K  + +  Y   V N+I I  +++ S E
Sbjct: 433 EWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 462


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 79  EYKKDSFKVKYKFPVFNIIKILHNVQKSVE 168
           E+K  + +  Y   V N+I I  +++ S E
Sbjct: 752 EWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 781


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 18.6 bits (36), Expect = 8.5
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = +3

Query: 126 QHHQDS 143
           QHHQDS
Sbjct: 105 QHHQDS 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,219
Number of Sequences: 438
Number of extensions: 1140
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3039192
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)