BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L19
(235 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 23 1.4
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 21 5.8
AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative odorant-b... 21 5.8
AJ302657-1|CAC35522.1| 115|Anopheles gambiae gSG6 protein protein. 21 5.8
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 21 7.7
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 21 7.7
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
protein protein.
Length = 1881
Score = 23.0 bits (47), Expect = 1.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 83 DEWKGILRVAGGNDKQ 130
D KGILRVAG D++
Sbjct: 1111 DPEKGILRVAGALDRE 1126
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 21.0 bits (42), Expect = 5.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 165 LLVRTPCFIGKPCLSLPPATR 103
+L+R+P KP +S+ PA++
Sbjct: 378 VLLRSPTPAKKPLISVAPASK 398
>AJ618918-1|CAF01997.1| 228|Anopheles gambiae putative
odorant-binding protein OBPjj2 protein.
Length = 228
Score = 21.0 bits (42), Expect = 5.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 144 FIGKPCLSLPPATR 103
F G PCL PP +
Sbjct: 55 FAGNPCLKGPPVPK 68
>AJ302657-1|CAC35522.1| 115|Anopheles gambiae gSG6 protein protein.
Length = 115
Score = 21.0 bits (42), Expect = 5.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 109 CRR*RQAGLPYETGSPD*QPCTSLD 183
C+ R+ LPY P +PC S D
Sbjct: 68 CKETREP-LPYMYACPGTEPCQSSD 91
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 20.6 bits (41), Expect = 7.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -2
Query: 195 WPFDIKRRTRLLVRTPC 145
+PFD RR ++ PC
Sbjct: 231 YPFDTVRRRMMMQSWPC 247
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 20.6 bits (41), Expect = 7.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -2
Query: 195 WPFDIKRRTRLLVRTPC 145
+PFD RR ++ PC
Sbjct: 231 YPFDTVRRRMMMQSWPC 247
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,939
Number of Sequences: 2352
Number of extensions: 3876
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11041875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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