Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L19
(235 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 124 4e-29
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 124 4e-29
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 124 4e-29
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 124 4e-29
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 122 2e-28
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 122 2e-28
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 103 8e-23
BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein. 60 1e-09
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 48 7e-06
AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6 pr... 40 0.001
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 13 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 72
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 73 LLLSKGHSCYRPRRTGERKR 92
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 124 bits (300), Expect = 4e-29
Identities = 59/80 (73%), Positives = 66/80 (82%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 122 bits (294), Expect = 2e-28
Identities = 58/80 (72%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE LR FYEKRM D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERTLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 122 bits (294), Expect = 2e-28
Identities = 58/80 (72%), Positives = 65/80 (81%), Gaps = 2/80 (2%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*C-DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVR 175
L EV DE KLR FYEKRM D LG+EWKG ++R++GGNDK GFPMKQGVLT+ RVR
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKXGFPMKQGVLTHGRVR 74
Query: 176 LLMSKGHSCYRPRRDGERKR 235
LL+SKGHSCYRPRR GERKR
Sbjct: 75 LLLSKGHSCYRPRRTGERKR 94
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 103 bits (248), Expect = 8e-23
Identities = 45/56 (80%), Positives = 52/56 (92%), Gaps = 1/56 (1%)
Frame = +2
Query: 71 DLLGDEWKG-ILRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKR 235
D LG+EWKG ++R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKR
Sbjct: 8 DALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKR 63
>BC052613-1|AAH52613.1| 99|Homo sapiens LOC728131 protein protein.
Length = 99
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 7/66 (10%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS*CD-LLGDEWKG-ILRVAGGNDKQGFPM-----KQGVLT 160
L +V DE KLR FYEK M LG+EWKG ++R++GGN+KQGF KQG+LT
Sbjct: 15 LIKVEDERKLRTFYEKHMATEIAAYALGEEWKGYVVRISGGNNKQGFLFVGGNNKQGILT 74
Query: 161 NSRVRL 178
+ RL
Sbjct: 75 HGHARL 80
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +2
Query: 170 VRLLMSKGHSCYRPRRDGERKR 235
+RLL+SKGHSCYRPRR GERKR
Sbjct: 2 IRLLLSKGHSCYRPRRTGERKR 23
>AL391834-7|CAM21144.1| 91|Homo sapiens ribosomal protein S6
protein.
Length = 91
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/32 (62%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 2 LFEVVDEHKLRIFYEKRMGAS-*CDLLGDEWK 94
L EV DE KLR FYEKRM D LG+EWK
Sbjct: 15 LIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,877,015
Number of Sequences: 237096
Number of extensions: 632132
Number of successful extensions: 1382
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 76,859,062
effective HSP length: 56
effective length of database: 63,581,686
effective search space used: 1335215406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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