Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L16
(337 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 140 1e-33
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 140 1e-33
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 140 1e-33
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 140 1e-33
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 140 1e-33
D14660-1|BAA03494.1| 280|Homo sapiens KIAA00104 protein. 31 0.67
BC030144-1|AAH30144.2| 292|Homo sapiens mitochondrial ribosomal... 31 0.67
AC005034-2|AAY14972.1| 280|Homo sapiens unknown protein. 31 0.67
BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein pr... 29 2.7
BC060862-1|AAH60862.1| 985|Homo sapiens ring finger protein 111... 29 2.7
AK131488-1|BAD18633.1| 602|Homo sapiens protein ( Homo sapiens ... 29 2.7
AK131304-1|BAD18471.1| 994|Homo sapiens protein ( Homo sapiens ... 29 2.7
BC018760-1|AAH18760.2| 464|Homo sapiens chromosome 1 open readi... 29 3.6
BC014059-1|AAH14059.2| 435|Homo sapiens C1orf142 protein protein. 29 3.6
BC007786-1|AAH07786.2| 449|Homo sapiens C1orf142 protein protein. 29 3.6
BC004418-1|AAH04418.1| 378|Homo sapiens C1orf142 protein protein. 29 3.6
BC001332-1|AAH01332.1| 381|Homo sapiens C1orf142 protein protein. 29 3.6
AY090635-1|AAM09082.1| 464|Homo sapiens SVAP1 protein protein. 29 3.6
AL731702-2|CAI21075.1| 464|Homo sapiens chromosome 1 open readi... 29 3.6
AL136378-6|CAI23071.1| 437|Homo sapiens chromosome 1 open readi... 29 3.6
AL136378-4|CAI23069.1| 464|Homo sapiens chromosome 1 open readi... 29 3.6
AK054633-1|BAB70779.1| 401|Homo sapiens protein ( Homo sapiens ... 29 3.6
BC012926-1|AAH12926.1| 594|Homo sapiens EPS8-like 3 protein. 28 6.2
AY074930-1|AAL76119.1| 593|Homo sapiens epidermal growth factor... 28 6.2
AL158847-6|CAI22583.1| 594|Homo sapiens EPS8-like 3 protein. 28 6.2
AL158847-5|CAI22582.1| 593|Homo sapiens EPS8-like 3 protein. 28 6.2
M82919-1|AAA52511.1| 473|Homo sapiens GABA-alpha receptor beta-... 28 8.2
BC010641-1|AAH10641.1| 473|Homo sapiens gamma-aminobutyric acid... 28 8.2
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 140 bits (339), Expect = 1e-33
Identities = 67/91 (73%), Positives = 76/91 (83%)
Frame = +1
Query: 64 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADSDA 243
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 244 ERSFRKFRLIAEDVQERNVLCNFHGMDLTTD 336
E +FRKF+LI EDVQ +N L NFHGMDLT D
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRD 108
>D14660-1|BAA03494.1| 280|Homo sapiens KIAA00104 protein.
Length = 280
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 307 CRVHYVPGHPQR*V*TCGKTFPHHYQPGDQQGRPQKHAPLDPQMQFLFP 161
CRVH P Q + G + P +QP + KH P++P+ +FL P
Sbjct: 22 CRVHAGPVRQQ----STGPSEPGAFQPPPKPVIVDKHRPVEPERRFLSP 66
>BC030144-1|AAH30144.2| 292|Homo sapiens mitochondrial ribosomal
protein L19 protein.
Length = 292
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 307 CRVHYVPGHPQR*V*TCGKTFPHHYQPGDQQGRPQKHAPLDPQMQFLFP 161
CRVH P Q + G + P +QP + KH P++P+ +FL P
Sbjct: 34 CRVHAGPVRQQ----STGPSEPGAFQPPPKPVIVDKHRPVEPERRFLSP 78
>AC005034-2|AAY14972.1| 280|Homo sapiens unknown protein.
Length = 280
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 307 CRVHYVPGHPQR*V*TCGKTFPHHYQPGDQQGRPQKHAPLDPQMQFLFP 161
CRVH P Q + G + P +QP + KH P++P+ +FL P
Sbjct: 22 CRVHAGPVRQQ----STGPSEPGAFQPPPKPVIVDKHRPVEPERRFLSP 66
>BX538130-1|CAD98031.1| 986|Homo sapiens hypothetical protein
protein.
Length = 986
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 322 PCRGNCRVHYVPGHPQR*V*TCGKTFPHHYQPGDQQGR-PQKHAPLDPQMQFLFPGC 155
PC G+ + H+ GHP +C + HH+Q P P+ P F P C
Sbjct: 486 PCGGSSQNHHALGHPHT---SCFQQHGHHFQHHHHHHHTPHPAVPVSP--SFSDPAC 537
>BC060862-1|AAH60862.1| 985|Homo sapiens ring finger protein 111
protein.
Length = 985
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 322 PCRGNCRVHYVPGHPQR*V*TCGKTFPHHYQPGDQQGR-PQKHAPLDPQMQFLFPGC 155
PC G+ + H+ GHP +C + HH+Q P P+ P F P C
Sbjct: 486 PCGGSSQNHHALGHPHT---SCFQQHGHHFQHHHHHHHTPHPAVPVSP--SFSDPAC 537
>AK131488-1|BAD18633.1| 602|Homo sapiens protein ( Homo sapiens
cDNA FLJ16671 fis, clone THYMU3001428. ).
Length = 602
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 322 PCRGNCRVHYVPGHPQR*V*TCGKTFPHHYQPGDQQGR-PQKHAPLDPQMQFLFPGC 155
PC G+ + H+ GHP +C + HH+Q P P+ P F P C
Sbjct: 85 PCGGSSQNHHALGHPHT---SCFQQHGHHFQHHHHHHHTPHPAVPVSP--SFSDPAC 136
>AK131304-1|BAD18471.1| 994|Homo sapiens protein ( Homo sapiens
cDNA FLJ16278 fis, clone NT2RI3001132, highly similar
to Mus musculus Arkadia (Arkadia) mRNA. ).
Length = 994
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 322 PCRGNCRVHYVPGHPQR*V*TCGKTFPHHYQPGDQQGR-PQKHAPLDPQMQFLFPGC 155
PC G+ + H+ GHP +C + HH+Q P P+ P F P C
Sbjct: 486 PCGGSSQNHHALGHPHT---SCFQQHGHHFQHHHHHHHTPHPAVPVSP--SFSDPAC 537
>BC018760-1|AAH18760.2| 464|Homo sapiens chromosome 1 open reading
frame 142 protein.
Length = 464
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 106 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 148
>BC014059-1|AAH14059.2| 435|Homo sapiens C1orf142 protein protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 77 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 119
>BC007786-1|AAH07786.2| 449|Homo sapiens C1orf142 protein protein.
Length = 449
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 91 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 133
>BC004418-1|AAH04418.1| 378|Homo sapiens C1orf142 protein protein.
Length = 378
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 20 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 62
>BC001332-1|AAH01332.1| 381|Homo sapiens C1orf142 protein protein.
Length = 381
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 23 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 65
>AY090635-1|AAM09082.1| 464|Homo sapiens SVAP1 protein protein.
Length = 464
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 106 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 148
>AL731702-2|CAI21075.1| 464|Homo sapiens chromosome 1 open reading
frame 142 protein.
Length = 464
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 106 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 148
>AL136378-6|CAI23071.1| 437|Homo sapiens chromosome 1 open reading
frame 142 protein.
Length = 437
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 97 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 139
>AL136378-4|CAI23069.1| 464|Homo sapiens chromosome 1 open reading
frame 142 protein.
Length = 464
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 106 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 148
>AK054633-1|BAB70779.1| 401|Homo sapiens protein ( Homo sapiens
cDNA FLJ30071 fis, clone ASTRO2000095. ).
Length = 401
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 209 SPLLISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
S + S + ++ KG + SLR SRNV++S I W L+
Sbjct: 61 SHFIFSSITILEKGHAKHWFSSLRPSRNVVFSIIEHFWRELLL 103
>BC012926-1|AAH12926.1| 594|Homo sapiens EPS8-like 3 protein.
Length = 594
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 253 KTFPHHYQPGDQQGRPQKHAPLDP--QMQFLF 164
KT H QPGD RP P P +MQ L+
Sbjct: 429 KTHNHDPQPGDPNSRPSSPKPAQPALKMQVLY 460
>AY074930-1|AAL76119.1| 593|Homo sapiens epidermal growth factor
receptor pathway substrate 8 related protein 3 protein.
Length = 593
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 253 KTFPHHYQPGDQQGRPQKHAPLDP--QMQFLF 164
KT H QPGD RP P P +MQ L+
Sbjct: 428 KTHNHDPQPGDPNSRPSSPKPAQPALKMQVLY 459
>AL158847-6|CAI22583.1| 594|Homo sapiens EPS8-like 3 protein.
Length = 594
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 253 KTFPHHYQPGDQQGRPQKHAPLDP--QMQFLF 164
KT H QPGD RP P P +MQ L+
Sbjct: 429 KTHNHDPQPGDPNSRPSSPKPAQPALKMQVLY 460
>AL158847-5|CAI22582.1| 593|Homo sapiens EPS8-like 3 protein.
Length = 593
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -1
Query: 253 KTFPHHYQPGDQQGRPQKHAPLDP--QMQFLF 164
KT H QPGD RP P P +MQ L+
Sbjct: 428 KTHNHDPQPGDPNSRPSSPKPAQPALKMQVLY 459
>M82919-1|AAA52511.1| 473|Homo sapiens GABA-alpha receptor beta-3
subunit protein.
Length = 473
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 218 LISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
L+SR +V G LS R+ RN+ Y + T S LI
Sbjct: 218 LVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILI 257
>BC010641-1|AAH10641.1| 473|Homo sapiens gamma-aminobutyric acid
(GABA) A receptor, beta 3 protein.
Length = 473
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 218 LISRLIVMRKGLSASSDLSLRMSRNVMYSAISTAWTSPLI 337
L+SR +V G LS R+ RN+ Y + T S LI
Sbjct: 218 LVSRNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILI 257
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,768,227
Number of Sequences: 237096
Number of extensions: 1076620
Number of successful extensions: 1925
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1909
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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