Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L15
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 78 2e-15
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 63 5e-11
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 60 3e-10
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 50 5e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 49 8e-07
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 47 3e-06
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 46 6e-06
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 46 6e-06
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 46 6e-06
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 46 6e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 46 7e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 46 7e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 46 7e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 46 7e-06
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 45 2e-05
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 44 3e-05
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 43 5e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 43 5e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 42 9e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 42 1e-04
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 42 1e-04
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 42 1e-04
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 42 1e-04
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 42 1e-04
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 42 1e-04
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 42 1e-04
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 42 1e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 42 2e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 42 2e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 42 2e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 4e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 40 4e-04
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 40 4e-04
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 40 4e-04
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 40 4e-04
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 40 4e-04
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 40 5e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 5e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 40 6e-04
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 40 6e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 40 6e-04
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 40 6e-04
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 39 9e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 39 9e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 38 0.001
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 38 0.001
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 38 0.001
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 38 0.003
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 38 0.003
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 36 0.011
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.011
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.011
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 35 0.018
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 34 0.032
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 33 0.042
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 33 0.042
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 33 0.042
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 33 0.056
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.056
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 33 0.056
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 33 0.074
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 33 0.074
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 33 0.074
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 33 0.074
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 33 0.074
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 33 0.074
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 33 0.074
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 33 0.074
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 32 0.098
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 32 0.098
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 32 0.098
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 31 0.17
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 31 0.17
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 31 0.23
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 31 0.30
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.30
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 0.30
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 31 0.30
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 31 0.30
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 30 0.40
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 30 0.52
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 30 0.52
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 29 0.91
AF016449-2|AAG24006.1| 333|Caenorhabditis elegans Seven tm rece... 29 1.2
Z49967-9|CAA90256.1| 328|Caenorhabditis elegans Hypothetical pr... 28 2.1
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 2.1
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 2.1
AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical ... 28 2.1
AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical ... 28 2.1
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 27 2.8
Z81032-5|CAL36491.1| 597|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z81032-2|CAD88213.1| 558|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z81032-1|CAB02719.1| 535|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z72507-11|CAA96628.2| 123|Caenorhabditis elegans Hypothetical p... 27 4.9
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 27 4.9
AL033510-10|CAA22063.2| 274|Caenorhabditis elegans Hypothetical... 27 4.9
AF067607-6|AAY86221.1| 461|Caenorhabditis elegans Hypothetical ... 27 4.9
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 27 4.9
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 27 4.9
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p... 26 8.5
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 26 8.5
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 26 8.5
AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine re... 26 8.5
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 78.2 bits (184), Expect = 2e-15
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
D+S RSVFVGNI Y+ +E+ ++ IFS+ G VL+ K+V DRETGKPKGYGF E+
Sbjct: 14 DRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 63.3 bits (147), Expect = 5e-11
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
SV+VGN+PY+ TEE++ + F+ VG V ++V+DRETG+P+G+ F E+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 60.5 bits (140), Expect = 3e-10
Identities = 23/48 (47%), Positives = 36/48 (75%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
SV+VGN P++ TEE+L + FS +G + ++V DRETG+P+G+ F E+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 58.0 bits (134), Expect = 2e-09
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
SV+VGN P++ TE+ L + FS+ G V ++V DRETG+P+G+ F E+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 58.0 bits (134), Expect = 2e-09
Identities = 28/73 (38%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +3
Query: 132 EYTFKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFS-EVGPVLTFKLVFDRE 308
++ ++DK K+++ K M ++FVGN+P+E TE+ L FS ++GPV ++V D++
Sbjct: 227 DHVIRVDKVGSKKKE--FGKDM-AIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKD 283
Query: 309 TGKPKGYGFCEYK 347
TGK KG+ F +K
Sbjct: 284 TGKGKGFAFVNFK 296
Score = 33.9 bits (74), Expect = 0.032
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Frame = +3
Query: 144 KMDKSKEKEEQSIMDKSMRS--------VFVGNIPYEATEEKLKDIFSEVGPVLTFKL 293
K D++K++E +++ + R+ VFVGN+P E+ ++ IFS+ G + + ++
Sbjct: 117 KRDRTKQRENRTLQKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 50.0 bits (114), Expect = 5e-07
Identities = 21/66 (31%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +3
Query: 153 KSKEKEEQSIMDKSMRS--VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKG 326
+S++KEE+++ +K + + +F+ N+PY E+ L+ +F + G V ++V D++TG KG
Sbjct: 262 ESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKG 321
Query: 327 YGFCEY 344
+ E+
Sbjct: 322 FAIVEF 327
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGF 335
+ V N+P TE++L+ F + G + L + +E GK +G+ F
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAF 47
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 159 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKL-VFDRETGKPKGYGF 335
K KE + + V N+P+EA+ ++++ +F G V T ++ + + +G+GF
Sbjct: 735 KRKEVKQKEQGECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGF 794
Query: 336 CEY 344
++
Sbjct: 795 VDF 797
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 49.2 bits (112), Expect = 8e-07
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
R++FVG I YE +E KL+ F G + +V D E GKP+GY F EY
Sbjct: 104 RTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 47.2 bits (107), Expect = 3e-06
Identities = 24/48 (50%), Positives = 28/48 (58%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
VFV NI EATE+ + D FSE G + L DR TG KGY EY+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYE 104
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 46.4 bits (105), Expect = 6e-06
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 150 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGY 329
D + +I+ S +F+G +P TE+++K++ GP+ F L D + G KGY
Sbjct: 275 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 333
Query: 330 GFCEY 344
F EY
Sbjct: 334 AFAEY 338
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSE 266
R ++VGNIP+ EE + D F++
Sbjct: 184 RRLYVGNIPFGCNEEAMLDFFNQ 206
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 46.4 bits (105), Expect = 6e-06
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 150 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGY 329
D + +I+ S +F+G +P TE+++K++ GP+ F L D + G KGY
Sbjct: 275 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 333
Query: 330 GFCEY 344
F EY
Sbjct: 334 AFAEY 338
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSE 266
R ++VGNIP+ EE + D F++
Sbjct: 184 RRLYVGNIPFGCNEEAMLDFFNQ 206
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 46.4 bits (105), Expect = 6e-06
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 150 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGY 329
D + +I+ S +F+G +P TE+++K++ GP+ F L D + G KGY
Sbjct: 250 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 308
Query: 330 GFCEY 344
F EY
Sbjct: 309 AFAEY 313
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSE 266
R ++VGNIP+ EE + D F++
Sbjct: 159 RRLYVGNIPFGCNEEAMLDFFNQ 181
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 46.4 bits (105), Expect = 6e-06
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +3
Query: 150 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGY 329
D + +I+ S +F+G +P TE+++K++ GP+ F L D + G KGY
Sbjct: 253 DMNSRMPVSTIVVDSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGY 311
Query: 330 GFCEY 344
F EY
Sbjct: 312 AFAEY 316
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSE 266
R ++VGNIP+ EE + D F++
Sbjct: 162 RRLYVGNIPFGCNEEAMLDFFNQ 184
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 46.0 bits (104), Expect = 7e-06
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 168 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 11 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 46.0 bits (104), Expect = 7e-06
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 168 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 21 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 46.0 bits (104), Expect = 7e-06
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 168 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 124 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
Score = 35.9 bits (79), Expect = 0.008
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
R+++VGN+ TE+ + +F+++G V K++FD G Y F E+
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEF 91
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 46.0 bits (104), Expect = 7e-06
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 168 EEQSIMDKSMR-SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
++QS +D + VFVG++ E +KL++ F G V K++ D T K KGYGF Y
Sbjct: 92 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
Score = 33.5 bits (73), Expect = 0.042
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFD 302
R+++VGN+ TE+ + +F+++G V K++FD
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +3
Query: 210 VGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
V N+P E E++L+D+F ++G V+ + D+ TG PKG+ F ++
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFE 225
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 44.8 bits (101), Expect = 2e-05
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
+++G + Y +E + +FS+ G V+ L+ D++TGK KG+ F YK
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYK 87
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 44.8 bits (101), Expect = 2e-05
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
D +FVG +PY +++ L + F + G + ++ DR T K +GYGF K
Sbjct: 31 DTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMK 84
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+SV+VGN+ Y AT E+++ F G V + DR +G PKG+ + E+
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEF 126
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 44.0 bits (99), Expect = 3e-05
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +3
Query: 189 KSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+S ++ + +P T+E+++ +F+ +G + + KLV D+ TG+ GYGF Y
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 43.2 bits (97), Expect = 5e-05
Identities = 19/47 (40%), Positives = 33/47 (70%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
VFV N+ ++AT+++LK +FS+ G V + + V ++ GKPKG F ++
Sbjct: 685 VFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKD-GKPKGIAFVDF 730
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 43.2 bits (97), Expect = 5e-05
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
VFVG++ E KL++ F + G V K++ D T K KGYGF Y
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
VFVG++ + + E LK F++ G V K++ D +T K KGYGF +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
SV+VGNI + T+ L+D+FS G + ++ K + Y F Y+
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYE 280
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +3
Query: 159 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFC 338
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 339 EY 344
+
Sbjct: 161 TF 162
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 195 MRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+R +F+G + ++ T+E+L + FS+ GPV+ ++ D T +G+GF +
Sbjct: 48 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 195 MRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+R +F+G + ++ T+E+L + FS+ GPV+ ++ D T +G+GF +
Sbjct: 68 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 195 MRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+R +F+G + ++ T+E+L + FS+ GPV+ ++ D T +G+GF +
Sbjct: 69 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +3
Query: 159 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFC 338
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 339 EY 344
+
Sbjct: 123 TF 124
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +3
Query: 159 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFC 338
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 339 EY 344
+
Sbjct: 123 TF 124
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +3
Query: 159 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFC 338
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 339 EY 344
+
Sbjct: 161 TF 162
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = +3
Query: 159 KEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFC 338
++ + +S + S + ++V + + TE+ L + F++ G V +++ D+ T KP+G+GF
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 339 EY 344
+
Sbjct: 161 TF 162
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 195 MRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
M ++VG+I +E E+ L+ F GP+ + + +D TG K + F EY+
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 195 MRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
M ++VG+I +E E+ L+ F GP+ + + +D TG K + F EY+
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 41.5 bits (93), Expect = 2e-04
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 195 MRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
M ++VG+I +E E+ L+ F GP+ + + +D TG K + F EY+
Sbjct: 101 MSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.3 bits (90), Expect = 4e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +3
Query: 210 VGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGF 335
V N+ TE+ L+D+F E G + LV+DR +G +G+GF
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGF 121
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/60 (30%), Positives = 36/60 (60%)
Frame = +3
Query: 165 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+EEQ +D +SVF+GN+ + +T E++++ F G ++ + D+ T K K + + E+
Sbjct: 46 EEEQKAIDA--KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEF 103
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKG 326
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKG 326
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKG 326
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 105 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 147
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKG 326
R+VF+G +P T E++ +FSE G VL + D++ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 39.9 bits (89), Expect = 5e-04
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 171 EQSIMDKSMRS-VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+QS K S VFVGNI + ++E ++ I +E G V ++K + GK +G+GFC +
Sbjct: 37 QQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRI-KGSNGKLQGFGFCHF 94
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 39.9 bits (89), Expect = 5e-04
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 171 EQSIMDKSMRS-VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+QS K S VFVGNI + ++E ++ I +E G V ++K + GK +G+GFC +
Sbjct: 37 QQSSQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRI-KGSNGKLQGFGFCHF 94
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.9 bits (89), Expect = 5e-04
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
R+++VG + TE+ L F G V+ + D E+GK +G+GF E+
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 39.5 bits (88), Expect = 6e-04
Identities = 18/60 (30%), Positives = 36/60 (60%)
Frame = +3
Query: 165 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+EEQ +D +SVF+GN+ + +T E++++ F G ++ + D+ T K K + + E+
Sbjct: 52 EEEQKAIDA--KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEF 109
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 39.5 bits (88), Expect = 6e-04
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +3
Query: 168 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
EEQ D RSV+VGN+ +++T ++++ F+ G V + D+ TG K + F E++
Sbjct: 38 EEQEKTDA--RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+ +FVG I E E L F++ G V ++ +DR G+ +G+ F E+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 153 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYG 332
K K E + + + VFVG +P + +E+ L+ F + G V + FD++T + +
Sbjct: 95 KGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFA 154
Query: 333 FCEYK 347
F ++
Sbjct: 155 FIVFE 159
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+ +FVG I E E L F++ G V ++ +DR G+ +G+ F E+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 153 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYG 332
K K E + + + VFVG +P + +E+ L+ F + G V + FD++T + +
Sbjct: 95 KGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFA 154
Query: 333 FCEYK 347
F ++
Sbjct: 155 FIVFE 159
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 39.1 bits (87), Expect = 9e-04
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 165 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
K Q+ + + VF+G + +T E +K F G V L+FD+ T + +G+GF +
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Score = 35.5 bits (78), Expect = 0.011
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+F+G + ++ T E L+D F G V ++ D T + +G+GF +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF 93
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 39.1 bits (87), Expect = 9e-04
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 165 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
K Q+ + + VF+G + +T E +K F G V L+FD+ T + +G+GF +
Sbjct: 123 KRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF 182
Score = 35.5 bits (78), Expect = 0.011
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+F+G + ++ T E L+D F G V ++ D T + +G+GF +
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF 93
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGF 335
R + V NIP++ E L +F +VGPV+ +++F+ E G KG+GF
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERGS-KGFGF 143
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGF 335
R + V NIP++ E L +F +VGPV+ +++F+ E G KG+GF
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERGS-KGFGF 143
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 38.3 bits (85), Expect = 0.001
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
++VG+IP + E+ L +F + G + +L+ D +G +GY F Y
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY 248
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 37.5 bits (83), Expect = 0.003
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
R VF+ NI YEA LK + E G + F + + GKPKG E++
Sbjct: 45 RMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFE 94
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+F+ N+ + +KL ++F G + D+E GK KG +Y
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKE-GKSKGVCVIQY 235
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+VFV N +EKL +FS+ G + + ++ D + GKPKG+GF +
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAF 285
Score = 34.7 bits (76), Expect = 0.018
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 192 SMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
SM S+++G++ + +E L + FS GPVL+ ++ D + GY + ++
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+VFV N +EKL +FS+ G + + ++ D + GKPKG+GF +
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAF 285
Score = 34.7 bits (76), Expect = 0.018
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +3
Query: 192 SMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
SM S+++G++ + +E L + FS GPVL+ ++ D + GY + ++
Sbjct: 55 SMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQ 106
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 144 KMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTF-KLVFDRETGKP 320
K++K+ E+ MD ++FVGN+ E E+ L D FS G +L K++ D ++G
Sbjct: 85 KVNKASAHEKN--MDVGA-NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTS 141
Query: 321 KGYGFCEY 344
KG+ F +
Sbjct: 142 KGFAFINF 149
Score = 36.7 bits (81), Expect = 0.005
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++VG + + +E L ++ + GPV++ + DR T +G+GF E+
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEF 61
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 144 KMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTF-KLVFDRETGKP 320
K++K+ E+ MD ++FVGN+ E E+ L D FS G +L K++ D ++G
Sbjct: 95 KVNKASAHEKN--MDVGA-NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTS 151
Query: 321 KGYGFCEY 344
KG+ F +
Sbjct: 152 KGFAFINF 159
Score = 36.7 bits (81), Expect = 0.005
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++VG + + +E L ++ + GPV++ + DR T +G+GF E+
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEF 71
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 168 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
+ Q+ +M S++VG++ + E L + FS GPVL+ ++ D T GY + ++
Sbjct: 22 QNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 168 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
+ Q+ +M S++VG++ + E L + FS GPVL+ ++ D T GY + ++
Sbjct: 22 QNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 168 EEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
+ Q+ +M S++VG++ + E L + FS GPVL+ ++ D T GY + ++
Sbjct: 22 QNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 34.7 bits (76), Expect = 0.018
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
D +V+V NIP+ TE+ L F GP+ K+++ R + + C +
Sbjct: 196 DPYTTNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILYPRSEEERRRPHICAF 248
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 33.9 bits (74), Expect = 0.032
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVG 272
R +FVG +P++ TE LKD F E G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 33.5 bits (73), Expect = 0.042
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPV-LTFKLVFDRETGKPKGYGFCEY 344
+ + R++++G++P + TEE L +F+E G K V+ ++ + KGY F E+
Sbjct: 64 NNAQRTLWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKD--ELKGYCFIEF 115
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 33.5 bits (73), Expect = 0.042
Identities = 15/64 (23%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +3
Query: 153 KSKEKEEQSIMDKSMRSVFV---GNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPK 323
+ + +++ + K ++ ++V IP+ E++L F + G VL ++ +R TG K
Sbjct: 14 RKQPQKQDKVQKKQLKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHK 73
Query: 324 GYGF 335
G+ +
Sbjct: 74 GWAY 77
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 33.5 bits (73), Expect = 0.042
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFD 302
R+++VGN+ TE+ + +F+++G V K++FD
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 33.1 bits (72), Expect = 0.056
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPV 278
D++ R++FVGN+P + E +++ +F E G V
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.056
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPV 278
D++ R++FVGN+P + E +++ +F E G V
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 33.1 bits (72), Expect = 0.056
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPV 278
D++ R++FVGN+P + E +++ +F E G V
Sbjct: 142 DEATRTLFVGNMPSDVKEREIRHVFEEHGKV 172
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F +
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F +
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F +
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F +
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F +
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 32.7 bits (71), Expect = 0.074
Identities = 14/53 (26%), Positives = 32/53 (60%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G F +
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 32.7 bits (71), Expect = 0.074
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
+ V+VGN+P + E++++DIF + G + K V D ++G+ + F E++
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRI---KYV-DIKSGRGPAFAFVEFE 54
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 32.7 bits (71), Expect = 0.074
Identities = 16/50 (32%), Positives = 32/50 (64%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
+ V+VGN+P + E++++DIF + G + K V D ++G+ + F E++
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRI---KYV-DIKSGRGPAFAFVEFE 54
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
V+VG +P +AT ++L++IF G + K+ R +P G+ F EY
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVAR---RPPGFAFVEY 46
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
V+VG +P +AT ++L++IF G + K+ R +P G+ F EY
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVAR---RPPGFAFVEY 46
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 32.3 bits (70), Expect = 0.098
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
V+VG +P +AT ++L++IF G + K+ R +P G+ F EY
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIR--KVWVAR---RPPGFAFVEY 46
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+FV + T+E L+ IFS G + ++V DR +G Y F E+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+FV + T+E L+ IFS G + ++V DR +G Y F E+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
+FV + T+E L+ IFS G + ++V DR +G Y F E+
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 31.1 bits (67), Expect = 0.23
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVGPVL------TFKLVFDRETGKPKG 326
+VFV I A E + D+FS G + K+ DR TG+PKG
Sbjct: 202 TVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKG 249
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPV 278
+FVGN+P E E +LK++FS G +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDI 142
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPV 278
+FVGN+P E E +LK++FS G +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDI 142
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 0.30
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 204 VFVGNIPYEATEEKLKDIFSEVGPV 278
+FVGN+P E E +LK++FS G +
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDI 142
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/47 (27%), Positives = 30/47 (63%)
Frame = +3
Query: 186 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKG 326
+++ R +F+G + + EE L++IF++ G + ++ D++ GK +G
Sbjct: 138 NRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKDIFSEVGPVLTFKLVFDRETGKPKGYGFCEYK 347
R +++ N+PY+ T E++ +IF + G V ++ T + +G F Y+
Sbjct: 19 RILYIKNLPYKITTEEMYEIFGKFGAVRQIRV---GNTAETRGTAFVVYE 65
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 11/61 (18%)
Frame = +3
Query: 198 RSVFVGNIPYEATEEKLKD-----------IFSEVGPVLTFKLVFDRETGKPKGYGFCEY 344
R V+VGN+P++ATE++L + +FS +GP+ + + +P G+ F +
Sbjct: 17 RQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWM-----AKRPPGFAFVTF 71
Query: 345 K 347
K
Sbjct: 72 K 72
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVG-PVLTFK 290
++ + NIP +EEKLK++F+E G V FK
Sbjct: 377 TLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 407
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 201 SVFVGNIPYEATEEKLKDIFSEVG-PVLTFK 290
++ + NIP +EEKLK++F+E G V FK
Sbjct: 539 TLHLSNIPTSVSEEKLKEMFAEAGFAVKAFK 569
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 29.1 bits (62), Expect = 0.91
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +3
Query: 165 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVG----PVLTFK---LVFDRETGKPK 323
KE + + +V+V N+P + T+E+ + S+ G + T K ++ E GK K
Sbjct: 168 KEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLK 227
Query: 324 GYGFCEY 344
G G C Y
Sbjct: 228 GDGRCCY 234
>AF016449-2|AAG24006.1| 333|Caenorhabditis elegans Seven tm
receptor protein 244 protein.
Length = 333
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 49 YLYVTSLCPFCLLLRL*VTNLVWFKSSKNI 138
Y + +L PF L++ L + L+W KS K I
Sbjct: 8 YEFQKTLTPFALIINLILIQLIWHKSPKAI 37
>Z49967-9|CAA90256.1| 328|Caenorhabditis elegans Hypothetical
protein F54C9.11 protein.
Length = 328
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = +3
Query: 159 KEKEEQSIMDKSMRSVFVGNIPYEAT-----EEKLKDIFSEVGPVLTFKLVFDRETGKP 320
K+K+ ++ DK S Y T E+K + E+ P+L + F RE G P
Sbjct: 168 KQKDAANVSDKKKASSLPSTSTYTLTPSEDREQKEANAVEEIDPILFSEFEFWREAGHP 226
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +2
Query: 50 TCTLLVCVLFVCYCGYRLRI*FGSRVLRIYFQNG*KQRKRGTEYHG*IHAISVC 211
T +L CV F YCG L RVL I + G +KR T + A SVC
Sbjct: 98 TLKILRCVCF--YCGRLLIDKSAPRVLEILKKTGTNSKKRLTMIYDLCKAKSVC 149
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = +2
Query: 50 TCTLLVCVLFVCYCGYRLRI*FGSRVLRIYFQNG*KQRKRGTEYHG*IHAISVC 211
T +L CV F YCG L RVL I + G +KR T + A SVC
Sbjct: 98 TLKILRCVCF--YCGRLLIDKSAPRVLEILKKTGTNSKKRLTMIYDLCKAKSVC 149
>AC024842-3|AAP13732.1| 1111|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2b protein.
Length = 1111
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 16 PNVLPLTLEPLY--LYVTSLCPFCLLLRL*VTNLVWF 120
PNV+P+ L P Y +Y L PF + + VT VW+
Sbjct: 184 PNVMPVKLSPFYELVYKEVLSPFYIFQAISVT--VWY 218
>AC024842-1|AAF59622.4| 1127|Caenorhabditis elegans Hypothetical
protein Y59H11AR.2a protein.
Length = 1127
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 16 PNVLPLTLEPLY--LYVTSLCPFCLLLRL*VTNLVWF 120
PNV+P+ L P Y +Y L PF + + VT VW+
Sbjct: 200 PNVMPVKLSPFYELVYKEVLSPFYIFQAISVT--VWY 234
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 180 IMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLTFKL 293
I D+ +V+V N+P +EEKL + S G V+ ++
Sbjct: 813 IYDREAATVYVDNLPEGCSEEKLLRLCSCYGTVVEVRI 850
>Z81032-5|CAL36491.1| 597|Caenorhabditis elegans Hypothetical
protein C02F4.2c protein.
Length = 597
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 234 TEEKLKDIFSEVGPVLTFKLVFDRETGKPK 323
TE +K + V LT V+DR TGKP+
Sbjct: 38 TERFVKTVQFPVSERLTVDQVYDRRTGKPR 67
>Z81032-2|CAD88213.1| 558|Caenorhabditis elegans Hypothetical
protein C02F4.2b protein.
Length = 558
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 234 TEEKLKDIFSEVGPVLTFKLVFDRETGKPK 323
TE +K + V LT V+DR TGKP+
Sbjct: 38 TERFVKTVQFPVSERLTVDQVYDRRTGKPR 67
>Z81032-1|CAB02719.1| 535|Caenorhabditis elegans Hypothetical
protein C02F4.2a protein.
Length = 535
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 234 TEEKLKDIFSEVGPVLTFKLVFDRETGKPK 323
TE +K + V LT V+DR TGKP+
Sbjct: 38 TERFVKTVQFPVSERLTVDQVYDRRTGKPR 67
>Z72507-11|CAA96628.2| 123|Caenorhabditis elegans Hypothetical
protein F17C11.6 protein.
Length = 123
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 150 DKSKEKEEQSIMDKSMRSVFVGNIPYEAT 236
D ++EK+ +++ D + R +FV +PY +T
Sbjct: 24 DMNREKQMEALKDLTFRLIFVVLLPYIST 52
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +3
Query: 102 YESSLVQEF*EYTFKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVL 281
+ L + + T +D K +E IM++ + G IP + LKD+ + + +
Sbjct: 108 FTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDAILINAI 167
Query: 282 TFKLVFDRETGKPKGYGF 335
F+ + R+ G+P F
Sbjct: 168 FFQGDWRRKFGEPAESNF 185
>AL033510-10|CAA22063.2| 274|Caenorhabditis elegans Hypothetical
protein Y40H7A.3 protein.
Length = 274
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 202 QCLLVIYLTRRLKKN*RIYL 261
QCL+++YL + LK N RI L
Sbjct: 23 QCLVILYLYKHLKHNTRINL 42
>AF067607-6|AAY86221.1| 461|Caenorhabditis elegans Hypothetical
protein C18H7.11 protein.
Length = 461
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Frame = +1
Query: 7 GLN---PNVLPLTLEPLYLYVTSLCPF 78
GLN PN+ PL ++ Y Y+TS+ PF
Sbjct: 211 GLNVFFPNIEPLQIKLDYWYITSMGPF 237
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +3
Query: 102 YESSLVQEF*EYTFKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVL 281
+ L + + T +D K +E IM++ + G IP + LKD+ + + +
Sbjct: 108 FTDELREHYNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVDAILINAI 167
Query: 282 TFKLVFDRETGKPKGYGF 335
F+ + R+ G+P F
Sbjct: 168 FFQGDWRRKFGEPAESNF 185
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 219 IPYEATEEKLKDIFSEVGPVLTFKLV-FDRETGKPKGYGFCEYK 347
+P+ ATE+ + + F+ LT + V F TG+P G + E+K
Sbjct: 71 LPFNATEKDIHEFFAG----LTIERVKFVCTTGRPNGEAYVEFK 110
>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
protein F23B2.11 protein.
Length = 1080
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 314 TSFPVKHKFKRQYRPNFTKYILQ 246
T F ++H++ Q RPNF K+ Q
Sbjct: 112 TIFSLEHRYYGQSRPNFDKFDAQ 134
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 219 IPYEATEEKLKDIFSEVG 272
+P+EATE++L+D F G
Sbjct: 12 LPWEATEQELRDFFGNNG 29
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 219 IPYEATEEKLKDIFSEVG 272
+P+EATE++L+D F G
Sbjct: 12 LPWEATEQELRDFFGNNG 29
>AC006680-2|AAK72302.1| 309|Caenorhabditis elegans Serpentine
receptor, class x protein9 protein.
Length = 309
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -2
Query: 329 IALRFTSFPVKHKFKRQYRPNFTKYILQFFFSRLVRYIT 213
I++R ++ V + ++Q R +Y+LQF F+ V YIT
Sbjct: 197 ISIRNSNKKVSTQIQKQRRKQEIRYLLQFMFTS-VFYIT 234
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,286,571
Number of Sequences: 27780
Number of extensions: 134676
Number of successful extensions: 557
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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