Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L14
         (403 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   1.3  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              23   1.7  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   4.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   5.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   6.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   6.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   6.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   6.9  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   6.9  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 274 VCVGAVGYIETSHGLRALLTI 336
           VCVGA+   E   GLRA++ +
Sbjct: 12  VCVGALTLEELQIGLRAVIPV 32


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 274 VCVGAVGYIETSHGLRALLTI 336
           VCVGA+   E   GLRA++ I
Sbjct: 12  VCVGALTLEEFQIGLRAVVPI 32


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 203 SGSRTTWVIPALYPMNAVRCT 141
           SGS+ TW I + + +N ++C+
Sbjct: 66  SGSKCTWTITSYHRIN-LKCS 85


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 163 GYKAGMTHVVREPDRPGSKINKKEI 237
           GY + M+    +P  P SKI + E+
Sbjct: 131 GYASPMSTSSYDPYSPNSKIGRDEL 155


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 168 QSWYDPR 188
           Q WYDPR
Sbjct: 115 QQWYDPR 121


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 168 QSWYDPR 188
           Q WYDPR
Sbjct: 115 QQWYDPR 121


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 168 QSWYDPR 188
           Q WYDPR
Sbjct: 166 QQWYDPR 172


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 168 QSWYDPR 188
           Q WYDPR
Sbjct: 115 QQWYDPR 121


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 274 VCVGAVGYIETSHGLRALLTI 336
           VCVGA+ + E   G++ L  I
Sbjct: 12  VCVGAMTHEELKTGIQTLQPI 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,138
Number of Sequences: 438
Number of extensions: 2297
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)