Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L12
(439 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 239 9e-64
03_01_0547 + 4093196-4093657,4094267-4095148 239 9e-64
03_01_0544 + 4082528-4082989,4083585-4084466 239 9e-64
03_01_0543 + 4076981-4077442,4078145-4079026 239 9e-64
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 65 2e-11
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 62 3e-10
02_04_0462 + 23131433-23132836 57 5e-09
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 52 2e-07
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 44 5e-05
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 44 5e-05
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 30 0.71
11_06_0516 + 24502645-24504507 29 2.2
10_08_1038 - 22485394-22485960,22486712-22487197 28 2.9
02_05_1202 + 34932291-34933027,34933297-34933774 28 2.9
03_03_0225 - 15587557-15588774 28 3.8
01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794 28 3.8
11_04_0242 - 15273774-15274043,15274131-15274235 27 5.0
09_04_0749 + 19919367-19920869 27 5.0
04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888 27 5.0
11_03_0079 + 9669666-9669728,9670779-9672545 27 6.6
07_03_1080 + 23815232-23817040 27 6.6
08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420 27 8.7
03_05_0728 - 27174157-27174408,27175316-27175364,27175454-271755... 27 8.7
02_01_0202 + 1366149-1366594,1368444-1368444,1368616-1368743,136... 27 8.7
01_02_0020 - 10269252-10269314,10269442-10269483,10269759-102702... 27 8.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 239 bits (584), Expect = 9e-64
Identities = 106/142 (74%), Positives = 125/142 (88%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPK 431
KFAE+ K+DRR+GK E PK
Sbjct: 359 KFAELVTKIDRRSGKELEKEPK 380
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 239 bits (584), Expect = 9e-64
Identities = 106/142 (74%), Positives = 125/142 (88%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPK 431
KFAE+ K+DRR+GK E PK
Sbjct: 359 KFAELVTKIDRRSGKELEKEPK 380
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 239 bits (584), Expect = 9e-64
Identities = 106/142 (74%), Positives = 125/142 (88%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPK 431
KFAE+ K+DRR+GK E PK
Sbjct: 359 KFAELVTKIDRRSGKELEKEPK 380
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 239 bits (584), Expect = 9e-64
Identities = 106/142 (74%), Positives = 125/142 (88%)
Frame = +3
Query: 6 RDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
+DVYKIGGIGTVPVGRVETG+LKPG VV F P+ +TTEVKSVEMHHEALQEA+PGDNVGF
Sbjct: 239 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGF 298
Query: 186 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIAC 365
NVKNV+VK+L+RGYVA +SK++P + AA FT+QVI++NHPGQI NGY PVLDCHT+HIA
Sbjct: 299 NVKNVAVKDLKRGYVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAV 358
Query: 366 KFAEIKEKVDRRTGKSTEDNPK 431
KFAE+ K+DRR+GK E PK
Sbjct: 359 KFAELVTKIDRRSGKELEKEPK 380
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 65.3 bits (152), Expect = 2e-11
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 2/143 (1%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 188
D YK +GTV +G++E+G + G ++ P +V SV + ++ A PG+NV
Sbjct: 189 DKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRVRSAAPGENVRVK 246
Query: 189 VKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIA 362
+ + ++ G+V K NP ++F AQ+ +L + GY VL H+
Sbjct: 247 LSGIEEDDITAGFVLSSIK-NPVSAISEFRAQLQILELLDNAIFTAGYKAVLHIHSVVEE 305
Query: 363 CKFAEIKEKVDRRTGKSTEDNPK 431
C+ E+ E++D + K + K
Sbjct: 306 CEIVELIEEIDLKRRKEGDIKKK 328
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 61.7 bits (143), Expect = 3e-10
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 188
D YK +GTV +G++E+G ++ G ++ P +V + + ++ A P +NV
Sbjct: 234 DKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVK 291
Query: 189 VKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLN--HPGQISNGYTPVLDCHTAHIA 362
+ + +++ G+V S NP +F AQ+ +L + GY VL H+
Sbjct: 292 LSGIEDEDIMAGFVL-SSIGNPVGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEE 350
Query: 363 CKFAEIKEKVDRRTGKSTEDNPK 431
C+ ++ E++D + K E +PK
Sbjct: 351 CEIVDLIEEIDMK--KKKEADPK 371
>02_04_0462 + 23131433-23132836
Length = 467
Score = 57.2 bits (132), Expect = 5e-09
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPGTVVVFAPANITTE--VKSVEMHHEALQEAVPGDNVG 182
DV+ I G GTV GR+E G +K G V T V VEM + + +A+ GDNVG
Sbjct: 285 DVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDNVG 344
Query: 183 FNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIS---NGYTPVLDCHTA 353
++ + ++ RG V + P D V+ + G+ S GY P T
Sbjct: 345 LLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKDEGGRHSPFFPGYRPQFYMRTT 404
Query: 354 HIACKFAEIKEKVD 395
+ +I D
Sbjct: 405 DVTGNVTKIMNDKD 418
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 52.4 bits (120), Expect = 2e-07
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 9 DVYKIGGIGTVPVGRVETGILKPG---TVVVFAPAN-ITTEVKSVEMHHEALQEAVPGDN 176
DV+ I G GTV GRVE G +K G ++ P+ + T V VEM + L GDN
Sbjct: 274 DVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGDN 333
Query: 177 VGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVL------NHPGQISNGYTPVL 338
VG ++ + +++RG V K + F A++ VL H +SN Y+P
Sbjct: 334 VGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEIYVLTKDEGGRHTAFLSN-YSPQF 390
Query: 339 DCHTAHIACK 368
TA + K
Sbjct: 391 YFRTADVTGK 400
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 44.0 bits (99), Expect = 5e-05
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Frame = +3
Query: 9 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDNV
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 186 NVKNVSVKELRRGYVAGDSKNNP--PRGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAH 356
+++ + +L + G NP P ++F +V+VL+ I GY H
Sbjct: 546 SLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVK 601
Query: 357 IACKFAEIKEKVDRRTGKSTEDNPK 431
A + +I +D + GK ++ P+
Sbjct: 602 EAARVTKIVALLD-KAGKPSKTAPR 625
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 44.0 bits (99), Expect = 5e-05
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Frame = +3
Query: 9 DVYKIGGIGTVPV-GRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 185
DV K G G++ETG ++ G+ V+ +P VKS+E + A GDNV
Sbjct: 486 DVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSIERDSNSCDIARAGDNVAV 545
Query: 186 NVKNVSVKELRRGYVAGDSKNNP--PRGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAH 356
+++ + +L + G NP P ++F +V+VL+ I GY H
Sbjct: 546 SLQGIDGSKL----ILGGILCNPGFPVPVSNFLELRVLVLDVTIPILIGYQVEFHIHHVK 601
Query: 357 IACKFAEIKEKVDRRTGKSTEDNPK 431
A + +I +D + GK ++ P+
Sbjct: 602 EAARVTKIVALLD-KAGKPSKTAPR 625
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 30.3 bits (65), Expect = 0.71
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +3
Query: 45 VGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRG 224
+G + + P T+V +P T KSVE +E L A G ++G + +
Sbjct: 252 LGTISMDKVTPSTIVGPSPVAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYA 311
Query: 225 YVAGDS---KNNPPRGAADFTAQVIVLNH 302
+ G+ K + +F A++ VL H
Sbjct: 312 ELRGEKAAIKKMDMQATHEFLAELKVLTH 340
>11_06_0516 + 24502645-24504507
Length = 620
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +3
Query: 129 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 308
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 309 QISNG 323
+I G
Sbjct: 170 EIRRG 174
>10_08_1038 - 22485394-22485960,22486712-22487197
Length = 350
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 278 SASHCAKS--PRSNIKRIHTCIGLPHSPHSL 364
S+S CA + P NI RIH IGL SP L
Sbjct: 96 SSSSCAAAAPPSPNILRIHAPIGLARSPAHL 126
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Frame = +3
Query: 3 TRDVYKIGGI-GTVPVGRVETGI------LKPGTVVVFAPANITTEVKSVEMHHEALQEA 161
TRD+Y++ G+ GT + + G L PG ++ PA+ + E EAL +
Sbjct: 324 TRDIYQMPGVAGTCDMAAIADGYFGALFPLNPGGILPLVPASCSPEALLEPHGREALSSS 383
Query: 162 VPGDNVG 182
D G
Sbjct: 384 AAADAGG 390
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 68 PKAWYCCRFCPC*HHY*SQVRGNAPRGSTRSCTR 169
P+ W C FC H Y ++ G A + SC +
Sbjct: 167 PEFWTACPFCSYVHQYQRELVGRALKCPNESCRK 200
>01_01_0677 + 5201089-5201177,5201325-5202183,5202321-5202794
Length = 473
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 286 TCAVKSAAPLGGLFFESPAT*PRRNSLTDTFLTLKPTLSPGTASCRAS 143
+ + A P G + RR L D+FL LK L PG+ + S
Sbjct: 274 SASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTS 321
>11_04_0242 - 15273774-15274043,15274131-15274235
Length = 124
Score = 27.5 bits (58), Expect = 5.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2
Query: 372 QICRLCGLCGNPIQVCI 322
QIC +C CG P VCI
Sbjct: 74 QICAVCTCCGGPHGVCI 90
>09_04_0749 + 19919367-19920869
Length = 500
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 39 VPVGRVETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF-NVKNVSV 206
VPVG + + PG V ++ T + + + HH +++ + VG NV +V V
Sbjct: 161 VPVGEADGPLRLPGLPVELDAGDVPTFLAAHDTHHPSMRALLMNQFVGLDNVDHVFV 217
>04_04_0436 + 25186144-25187915,25188020-25188077,25188472-25188888
Length = 748
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 216 RRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGY 326
RRG +++ PR +A + QV+ HP +S GY
Sbjct: 175 RRGSNCVENRRRKPRSSAQSSPQVVTPRHP--VSEGY 209
>11_03_0079 + 9669666-9669728,9670779-9672545
Length = 609
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 273 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 395
FTA+ +H Q++N VLDC AH+ CK+ + E ++
Sbjct: 572 FTAENRSKSH--QVNN-VLAVLDCLQAHMECKYDMLTESLE 609
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -1
Query: 64 PVSTLPTGTVPIPPILYTS 8
P S+ PTGT P PP+ +S
Sbjct: 123 PASSTPTGTAPTPPLSTSS 141
>08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420
Length = 647
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 273 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVD 395
FTA+ +H Q++N +LDC AH+ CK+ + E ++
Sbjct: 610 FTAENRSKSH--QVNN-VLAILDCLQAHMECKYDMLTESLE 647
>03_05_0728 - 27174157-27174408,27175316-27175364,27175454-27175536,
27175673-27175753,27175838-27175894,27176103-27176202,
27176280-27176350,27176427-27176567,27176657-27176863,
27177442-27177612,27177735-27177815,27177887-27177940,
27178040-27178154,27178302-27178441,27178976-27179197,
27179278-27179376,27179461-27179580,27179776-27179981,
27180072-27180249,27180426-27180486,27180587-27180696,
27180765-27180896,27181124-27181165,27181592-27181762,
27181806-27181808,27181848-27181974,27182130-27182164,
27182982-27183083,27183167-27183224,27183314-27183415,
27183513-27183659,27183744-27183880,27183973-27184122,
27184234-27184393,27184930-27185075,27185162-27185305,
27185535-27185663,27186376-27186420,27187103-27187192,
27187473-27187475
Length = 1506
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 54 VETGILKPGTVVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKEL 215
+E L G VVV +P N ++ E+H +A +N F+V+ + K +
Sbjct: 1422 IEGSQLTSGKVVVDSPTNDIWQIGRYEVHRSLASDA--SENHSFSVQQTAPKRM 1473
>02_01_0202 +
1366149-1366594,1368444-1368444,1368616-1368743,
1368943-1369039
Length = 223
Score = 26.6 bits (56), Expect = 8.7
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 168 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVL 338
GD+ G V RR V GD + P + DF V++L H S+GY +L
Sbjct: 20 GDSGGGEAPAAEVLRRRRVPVPGDGLSPIPMFSVDFRLFVLILPH----SHGYLVLL 72
>01_02_0020 -
10269252-10269314,10269442-10269483,10269759-10270244,
10270338-10270421,10270491-10270556,10270718-10270810,
10270901-10271987,10273338-10273362,10273881-10273899
Length = 654
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 91 TTTVPGFRIPVSTLPTGTVPIPP 23
T+T+P F +P T+P+ +PP
Sbjct: 538 TSTMPMFGVPGQTIPSSASSVPP 560
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,841,477
Number of Sequences: 37544
Number of extensions: 269112
Number of successful extensions: 812
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 823860276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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