Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L11
(155 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 79 3e-16
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 79 3e-16
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 78 7e-16
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 66 3e-12
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 66 3e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 2e-06
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 44 1e-05
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 44 1e-05
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 44 1e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 42 4e-05
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 42 8e-05
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 41 1e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 38 7e-04
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 38 0.001
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 38 0.001
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 38 0.001
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 38 0.001
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.003
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 36 0.005
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 36 0.005
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 35 0.009
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 35 0.009
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 32 0.048
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 32 0.063
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 32 0.063
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 32 0.063
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 31 0.084
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.084
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 31 0.084
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 31 0.084
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 31 0.084
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 31 0.084
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 31 0.084
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 31 0.084
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 31 0.084
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 29 0.34
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 29 0.34
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 29 0.59
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 29 0.59
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 29 0.59
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 29 0.59
AF016422-5|AAG24171.1| 291|Caenorhabditis elegans Serpentine re... 27 1.8
Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical pr... 27 2.4
U23524-8|AAC46826.1| 198|Caenorhabditis elegans Hypothetical pr... 27 2.4
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 27 2.4
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 27 2.4
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 26 4.2
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 26 4.2
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 25 5.5
Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 25 7.3
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 25 9.6
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 79.4 bits (187), Expect = 3e-16
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
S IK+FVLDEADEMLSRGFKDQI++VF + DVQV+LLSATMP +VL+V
Sbjct: 170 SRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDV 219
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 79.4 bits (187), Expect = 3e-16
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
S IK+FVLDEADEMLSRGFKDQI++VF + DVQV+LLSATMP +VL+V
Sbjct: 170 SRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDV 219
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 78.2 bits (184), Expect = 7e-16
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
S IK+FVLDEADEMLS+GFKDQI++VF + DVQV+LLSATMP +VL+V
Sbjct: 129 SRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDV 178
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 66.1 bits (154), Expect = 3e-12
Identities = 28/48 (58%), Positives = 40/48 (83%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
IKL VLDEADEML++GFK+Q++D++ L QV+LLSAT+P ++LE+
Sbjct: 169 IKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEM 216
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 66.1 bits (154), Expect = 3e-12
Identities = 28/48 (58%), Positives = 40/48 (83%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
IKL VLDEADEML++GFK+Q++D++ L QV+LLSAT+P ++LE+
Sbjct: 169 IKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLPHEILEM 216
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 46.8 bits (106), Expect = 2e-06
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3
Query: 15 KLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMP 137
+ VLDEAD ML GF+D+I +F A Q +L SATMP
Sbjct: 348 RYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMP 388
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 44.4 bits (100), Expect = 1e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
I+ FVLDEAD ML + DQ+ +F +S Q +LLSAT+ +++
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 44.4 bits (100), Expect = 1e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
I+ FVLDEAD ML + DQ+ +F +S Q +LLSAT+ +++
Sbjct: 236 IQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNI 280
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 44.0 bits (99), Expect = 1e-05
Identities = 18/47 (38%), Positives = 33/47 (70%)
Frame = +3
Query: 15 KLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
++ VLDEAD ML F+DQ++++ + + + Q +L SATM +++ E+
Sbjct: 320 QVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDEL 366
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 42.3 bits (95), Expect = 4e-05
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 9 TIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
++++ VLDEAD ML GF Q++ + L A+ Q +L SAT +V ++
Sbjct: 222 SLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQTLLFSATQTRNVKDL 270
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 41.5 bits (93), Expect = 8e-05
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 24 VLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
VLDEAD ML GF+ QI + + D Q ++ SAT P +V
Sbjct: 281 VLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEV 321
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMP 137
+ VLDEAD M +GF+ QI V + D Q +L SAT P
Sbjct: 455 VTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFP 496
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 38.3 bits (85), Expect = 7e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 15 KLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
K VLDEAD++LS+ F+ + + L + QV+L SAT P+ V
Sbjct: 187 KTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSATFPNTV 230
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMP 137
S ++ V DEAD + GF+DQ+ + + Q +L SAT+P
Sbjct: 166 SYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLP 209
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 37.9 bits (84), Expect = 0.001
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMP 137
S ++ V DEAD + GF+DQ+ + + Q +L SAT+P
Sbjct: 166 SYVQYVVFDEADRLFEMGFQDQLTETLKRIPESRQTLLFSATLP 209
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMP 137
S + FVLDEAD+++ F+D I+ + L QV + SAT P
Sbjct: 163 SHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYP 206
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 37.5 bits (83), Expect = 0.001
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMP 137
S + FVLDEAD+++ F+D I+ + L QV + SAT P
Sbjct: 163 SHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVFSATYP 206
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 6 STIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
+++ VLDEAD ML GF+ I + + D V L SAT P+ V
Sbjct: 235 ASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWPEGV 281
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 35.5 bits (78), Expect = 0.005
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
+ V+DEAD +LS G+++++ + + L Q ++ SAT+ DD+
Sbjct: 171 VSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDM 215
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 35.5 bits (78), Expect = 0.005
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
+ V+DEAD +LS G+++++ + + L Q ++ SAT+ DD+
Sbjct: 238 VSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTSATLKDDM 282
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 34.7 bits (76), Expect = 0.009
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 12 IKLFVLDEADEML-SRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
+K FVLDE D+M+ + + ++ M QV++ SAT+P ++ V
Sbjct: 186 VKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTV 234
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 34.7 bits (76), Expect = 0.009
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 12 IKLFVLDEADEML-SRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
+K FVLDE D+M+ + + ++ M QV++ SAT+P ++ V
Sbjct: 186 VKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTV 234
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 32.3 bits (70), Expect = 0.048
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 24 VLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
V DEAD M GF+ Q+ + + D Q ++ SAT V
Sbjct: 418 VFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKV 458
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 31.9 bits (69), Expect = 0.063
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 6 STIKLFVLDEADEML-SRGFKDQIHDVFTML---SADVQVILLSATMPDDVL 149
S I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+
Sbjct: 353 SKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVI 404
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 31.9 bits (69), Expect = 0.063
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 6 STIKLFVLDEADEML-SRGFKDQIHDVFTML---SADVQVILLSATMPDDVL 149
S I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+
Sbjct: 378 SKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVI 429
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 31.9 bits (69), Expect = 0.063
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Frame = +3
Query: 6 STIKLFVLDEADEML-SRGFKDQIHDVFTML---SADVQVILLSATMPDDVL 149
S I+ VLDEAD M+ +GF D ++ M+ S VQ +L SAT + V+
Sbjct: 762 SKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSVQSMLFSATYDEPVI 813
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 31.5 bits (68), Expect = 0.084
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDV 146
+K ++DEAD +L+ F+ ++ + ++ + + L SATM V
Sbjct: 188 LKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKV 232
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.5 bits (68), Expect = 0.084
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 15 KLFVLDEADEML-SRGFKDQIHDVFTMLS----ADVQVILLSATMPDDVLE 152
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E
Sbjct: 494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQE 544
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.084
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 15 KLFVLDEADEML-SRGFKDQIHDVFTMLS----ADVQVILLSATMPDDVLE 152
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQE 755
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.084
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 15 KLFVLDEADEML-SRGFKDQIHDVFTMLS----ADVQVILLSATMPDDVLE 152
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQE 755
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.5 bits (68), Expect = 0.084
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 15 KLFVLDEADEML-SRGFKDQIHDVFTMLS----ADVQVILLSATMPDDVLE 152
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E
Sbjct: 494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQE 544
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 31.5 bits (68), Expect = 0.084
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
+K ++DEAD +L GF+ ++ V L Q +L SAT V E+
Sbjct: 216 MKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHSPKVDEL 263
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 31.5 bits (68), Expect = 0.084
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 15 KLFVLDEADEML-SRGFKDQIHDVFTMLS----ADVQVILLSATMPDDVLE 152
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E
Sbjct: 494 RFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSATFPDSVQE 544
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 31.5 bits (68), Expect = 0.084
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 15 KLFVLDEADEMLSRGFKDQIHDVF---TMLSADVQV-ILLSATMPDDV 146
+ VLDEAD ML GF+ QI + M S + ++ + SAT P ++
Sbjct: 327 RYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEI 374
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.084
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = +3
Query: 15 KLFVLDEADEML-SRGFKDQIHDVFTMLS----ADVQVILLSATMPDDVLE 152
+ FVLDEAD M+ + GF I + S + Q ++ SAT PD V E
Sbjct: 705 RFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSATFPDSVQE 755
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 29.5 bits (63), Expect = 0.34
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 58 DSKIKSMMFSRCCLLMFRLFYFLLQCLMMY 147
D K +M+ RCCL+ F +F + C +M+
Sbjct: 498 DWKFAAMVVDRCCLITFSVFIVVSTCGIMF 527
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 29.5 bits (63), Expect = 0.34
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 12 IKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPDDVLEV 155
+K FVLDE D+M+ G D DV + QV++ SAT+P ++ V
Sbjct: 185 VKYFVLDECDKMI--GDADMRRDVQEI----KQVMMFSATLPKELRTV 226
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 28.7 bits (61), Expect = 0.59
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 9 TIKLFVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSAT 131
T++L V+DEAD F+D + ++ + + + L SAT
Sbjct: 159 TLQLLVIDEADRFNEIQFEDHMREILSCIPKQRRTGLFSAT 199
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 15 KLFVLDEADEMLSRGFKDQIHDV 83
+ VLDEAD ML GF+ QI +
Sbjct: 299 RYLVLDEADRMLDMGFEPQIRKI 321
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 15 KLFVLDEADEMLSRGFKDQIHDV 83
+ VLDEAD ML GF+ QI +
Sbjct: 283 RYLVLDEADRMLDMGFEPQIRKI 305
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 15 KLFVLDEADEMLSRGFKDQIHDV 83
+ VLDEAD ML GF+ QI +
Sbjct: 280 RYLVLDEADRMLDMGFEPQIRKI 302
>AF016422-5|AAG24171.1| 291|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 58 protein.
Length = 291
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 21 FVLDEADEMLSRGFKDQIHDVFTMLSADVQVILLSATMPD 140
F+L + +SR K + D F + S D+ + L+A PD
Sbjct: 200 FILRSTNTAISRATKITLLDSFIIFSFDLFPVFLTARFPD 239
>Z68341-4|CAA92767.2| 1266|Caenorhabditis elegans Hypothetical
protein F01G4.3 protein.
Length = 1266
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 78 DVFTMLSADVQVILLSATMPDDV 146
+V ML A V++++LSAT+P+ V
Sbjct: 421 EVLIMLPAHVKIVMLSATVPNCV 443
>U23524-8|AAC46826.1| 198|Caenorhabditis elegans Hypothetical
protein C29F5.7 protein.
Length = 198
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 42 EMLSRGFKDQIHDVFTMLSADVQVILLSATMPDD 143
+ +SRGF D+F + A+ LSA +PD+
Sbjct: 121 DFISRGFNSHFWDIFLVCMAEKIDETLSAYIPDE 154
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 6 STIKLFVLDEADEML-SRGFKDQIHDVF-TMLSADVQVILLSATMPDDV 146
S +K VLDEAD M+ S F +++ + + Q +L SA+ +D+
Sbjct: 889 SKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDL 937
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +3
Query: 6 STIKLFVLDEADEML-SRGFKDQIHDVF-TMLSADVQVILLSATMPDDV 146
S +K VLDEAD M+ S F +++ + + Q +L SA+ +D+
Sbjct: 889 SKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQTVLFSASFSEDL 937
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 24 VLDEADEMLSRGFKDQIHDV 83
+LDEAD ML GF+ + V
Sbjct: 457 ILDEADRMLDMGFEPDVQKV 476
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 134 HCSRK*NNLNISRQHRENIMDLIFE 60
HC R L +RQH E DL+FE
Sbjct: 1009 HCVRTVIRLLEARQHLERAFDLLFE 1033
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 25.4 bits (53), Expect = 5.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 145 TSSGIVAESKIT*TSADNIVKTSWI*SLNPLDNISSASSST 23
TSSG +A+S + T ++ + S S+ P DN S ST
Sbjct: 45 TSSGNMADSNLEETCLEHDSRPSSASSITPADNTSLLDLST 85
>Z81015-4|CAB02658.2| 1170|Caenorhabditis elegans Hypothetical
protein C11E4.6 protein.
Length = 1170
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 67 SLNPLDNISSASSSTKS 17
SL+P DN+SS SS KS
Sbjct: 747 SLSPTDNLSSPSSDQKS 763
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 21 FVLDEADEMLSRGFKDQIHD 80
F LDE DE+L R F + +D
Sbjct: 375 FFLDEEDEVLKRNFAEATND 394
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 24.6 bits (51), Expect = 9.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 70 KSMMFSRCCLLMFRLFYFLLQC 135
K MF+ C LL +F+ +L C
Sbjct: 356 KMKMFNSCALLGSSIFFIILSC 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,085,669
Number of Sequences: 27780
Number of extensions: 39057
Number of successful extensions: 134
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 12,740,198
effective HSP length: 32
effective length of database: 11,851,238
effective search space used: 225173522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -