Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L11
         (155 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       38   2e-05
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   1.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   1.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   1.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   1.8  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    19   5.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    19   5.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       19   7.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    18   9.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    18   9.8  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 37.5 bits (83), Expect = 2e-05
 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = +3

Query: 6   STIKLFVLDEADEMLSRGFKDQIH---DVFTMLS-ADVQVILLSATMPDDV 146
           S+++  VLDEAD ML  GF   I    D  TM+   + Q ++ SAT PD+V
Sbjct: 346 SSVQFLVLDEADRMLDMGFLPSIEKMVDHETMVPLGERQTLMFSATFPDEV 396


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 93  LSADVQVILLSATMPDD 143
           L+ +V V+LLS   PD+
Sbjct: 86  LTVNVSVLLLSLASPDE 102


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 93  LSADVQVILLSATMPDD 143
           L+ +V V+LLS   PD+
Sbjct: 86  LTVNVSVLLLSLASPDE 102


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 93  LSADVQVILLSATMPDD 143
           L+ +V V+LLS   PD+
Sbjct: 137 LTVNVSVLLLSLASPDE 153


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 93  LSADVQVILLSATMPDD 143
           L+ +V V+LLS   PD+
Sbjct: 86  LTVNVSVLLLSLASPDE 102


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 5/17 (29%), Positives = 9/17 (52%)
 Frame = -3

Query: 51  ITFHQLHLARRA*WCLH 1
           +TFH++ +     W  H
Sbjct: 100 VTFHEMSIPNHYLWLYH 116


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -2

Query: 130 VAESKIT*TSADNIVKTSW 74
           +A+ K+T     NI+ T W
Sbjct: 434 IADIKLTTNQQRNILNTFW 452


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 118 YFLLQCLMMYW 150
           Y L   +MMYW
Sbjct: 204 YSLFGMIMMYW 214


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +1

Query: 82  FSRCCLLMFRLFYFLLQCLMMY 147
           F   C    ++ YF+  CL  Y
Sbjct: 272 FVGSCRKTDQILYFIRGCLQTY 293


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +1

Query: 82  FSRCCLLMFRLFYFLLQCLMMY 147
           F   C    ++ YF+  CL  Y
Sbjct: 310 FVGSCRKTDQILYFIRGCLQTY 331


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,745
Number of Sequences: 438
Number of extensions: 403
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 31
effective length of database: 132,765
effective search space used:  2655300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)