Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L08
(269 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 128 6e-31
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 125 6e-30
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 110 1e-25
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 80 2e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 48 1e-06
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 47 2e-06
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 44 1e-05
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 44 2e-05
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 43 4e-05
03_01_0034 + 318432-318825,318902-319851 43 4e-05
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 42 9e-05
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 42 9e-05
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 42 9e-05
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 29 0.39
06_03_0020 + 15515768-15517696 29 0.51
01_06_0662 + 30987187-30987277,30987825-30990214 29 0.67
07_01_0284 - 2082249-2082256,2082496-2083009 28 0.89
03_02_0497 - 8891852-8892270,8892368-8892473,8892573-8892911,889... 28 0.89
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 28 0.89
02_04_0288 + 21607289-21608251 28 1.2
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 27 1.6
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 27 1.6
12_02_0299 - 17051570-17052474,17053542-17053755 27 2.7
09_04_0074 - 14336430-14338268 27 2.7
09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,397... 27 2.7
08_02_1414 + 26901937-26902597,26903361-26903397,26903733-269037... 27 2.7
08_01_1036 + 10520727-10521117,10521301-10521479,10521603-105225... 27 2.7
06_03_0091 - 16515330-16515548,16515669-16515779,16517483-165175... 27 2.7
05_03_0370 + 13144612-13144639,13144749-13145260,13146995-131473... 27 2.7
04_04_0900 + 29232365-29232931 27 2.7
02_04_0150 - 20215070-20217577 27 2.7
01_04_0051 + 15430980-15431591 27 2.7
12_02_0044 - 12807372-12807555,12807782-12807840,12807943-128080... 26 3.6
01_06_1634 + 38789097-38789936 26 3.6
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 26 3.6
04_01_0253 - 3358090-3359052 26 4.7
04_01_0211 + 2649405-2649950,2650100-2650285,2650367-2650583,265... 26 4.7
11_06_0594 + 25349612-25352530 25 6.3
11_01_0482 - 3714442-3715593 25 6.3
04_01_0103 + 1082077-1082167,1083037-1085477 25 6.3
03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706... 25 6.3
02_04_0017 + 18937774-18937864,18938505-18940945 25 6.3
01_06_0143 - 26916490-26917719 25 6.3
11_04_0435 + 17710853-17711003,17711312-17711547,17712417-17712752 25 8.3
10_01_0265 + 2808271-2809064,2809624-2809807 25 8.3
08_01_0999 + 10145782-10146392,10147665-10147734,10149409-101496... 25 8.3
06_03_1507 - 30646168-30646254,30646350-30646490,30648109-306482... 25 8.3
06_03_0202 - 17860937-17861542 25 8.3
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 25 8.3
01_01_1104 + 8747053-8747478 25 8.3
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 128 bits (309), Expect = 6e-31
Identities = 52/59 (88%), Positives = 58/59 (98%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQPDGQMP +KT+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 125 bits (301), Expect = 6e-30
Identities = 50/59 (84%), Positives = 58/59 (98%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRECIS+HIGQAG+Q+GNACWELYCLEHGIQ DGQMP+++T+GGGDD+FNTFFSETGAG
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAG 59
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 110 bits (265), Expect = 1e-25
Identities = 45/59 (76%), Positives = 53/59 (89%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE IS+HIGQAG+Q+GNACWELYCLEHGI+PDG MP++ T+G D+FNTFFSETGAG
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAG 59
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 80.2 bits (189), Expect = 2e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTE 208
MRE IS+HIGQAG+Q+GN+CWELYCLEHGIQPDG MP +
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 28.7 bits (61), Expect = 0.67
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 203 TEKTLGGGDDSFNTFFSETGAG 268
++ T G D+FNTFFSET +G
Sbjct: 98 SDTTPGIARDAFNTFFSETSSG 119
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 48.0 bits (109), Expect = 1e-06
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +2
Query: 95 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFF 250
RE I++ +GQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFF 52
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 46.8 bits (106), Expect = 2e-06
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +2
Query: 89 KMRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
KMRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++E G
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYNEASCG 237
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 44.4 bits (100), Expect = 1e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE + + GQ G QIG+ WE+ C EHGI P G+ L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDL--QLERVNVYYNEASCG 57
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE + + GQ G QIG WE+ C EHGI P G+ L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCG 57
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 42.7 bits (96), Expect = 4e-05
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGG 57
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 42.7 bits (96), Expect = 4e-05
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE + + GQ G QIG WE+ C EHGI G+ + L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCG 57
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 41.5 bits (93), Expect = 9e-05
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE + + GQ G QIG WE+ C EHGI G+ + L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGG 57
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 41.5 bits (93), Expect = 9e-05
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE + + GQ G QIG WE+ C EHG+ G+ + L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGG 57
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 41.5 bits (93), Expect = 9e-05
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +2
Query: 92 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFFSETGAG 268
MRE + + GQ G QIG WE+ C EHGI G+ + L + N +++E G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGG 57
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 29.5 bits (63), Expect = 0.39
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -3
Query: 231 SSPPPSVFSVGICPSGWIPCSRQYSSQ 151
S P P S I SGW+PCSR S+
Sbjct: 147 SMPYPITLSAVISLSGWLPCSRTLRSK 173
>06_03_0020 + 15515768-15517696
Length = 642
Score = 29.1 bits (62), Expect = 0.51
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +2
Query: 14 LHCEPATPHALHITTAFCKLSSTYTKMRECISV--HIGQAGVQIGNACWELY---CLEHG 178
LH +P T H L + AF +L + + +R+ +++ + AG+ C+ HG
Sbjct: 25 LHSDPHTAHPLLV--AFSRLCA-HGPLRDALALLPDLAAAGLTADPVAVSRLIKLCVRHG 81
Query: 179 IQPDGQMPTEKTLGGGD 229
DG++ GGGD
Sbjct: 82 TPSDGRLIHRHVFGGGD 98
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 28.7 bits (61), Expect = 0.67
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 247 ECIEGVIPAAQRLLRGHLSIRLDTMLEAVQLPACVADLNSGLPDVY 110
+CIEGV + +LR L R+ +L ++ C +L G + Y
Sbjct: 130 DCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAY 175
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 28.3 bits (60), Expect = 0.89
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 264 APVSLKNVLKESSPPPSVFSVGICPSGWIPCSRQYSSQHALPI 136
+P+ K E PPPS + I W P + ++Q +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>03_02_0497 -
8891852-8892270,8892368-8892473,8892573-8892911,
8893065-8893415
Length = 404
Score = 28.3 bits (60), Expect = 0.89
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 173 ARGSTAPSMRCRSELRLARC 114
+RGS AP+ CR E++L +C
Sbjct: 168 SRGSVAPAPTCRCEMQLPKC 187
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 28.3 bits (60), Expect = 0.89
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -2
Query: 247 ECIEGVIPAAQRLLRGHLSIRLDTMLEAVQLPACVADLNSGLPDVY 110
+CIEGV + +LR L+ R+ +L ++ C +L + Y
Sbjct: 130 DCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQQSGEEAY 175
>02_04_0288 + 21607289-21608251
Length = 320
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 103 HLSTHRASRSSDRQRMLGAVLPRAWYPA*W-TDAHGEDA 216
HL+ H + R+R+ GAVL W+ W ++A GE+A
Sbjct: 168 HLAMHHHHDAPPRRRLRGAVLIHPWF---WGSEAVGEEA 203
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 225 PPPSVFSVGICPSGWIPCSR 166
P P S I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 228 SPPPSVFSVGICPSGWIPCSRQYSSQ 151
+P P SV + SGW+PC+R ++
Sbjct: 149 NPYPVNLSVSVGLSGWLPCARSLKNK 174
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 267 PAPVSLKNVLKESSPPPSVFSVGICPSGWIPCSRQYSSQHALPI*TPACP 118
P P+ L SPPP F + P W P + H PI +P P
Sbjct: 241 PFPLPPIPFLTPPSPPPPAFPFPLPPWPWAP-PPAFPFPHLPPIFSPPSP 289
>09_04_0074 - 14336430-14338268
Length = 612
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 114 TSGKPEFRSATHAGSCTASSMVSSLMDRCPRR 209
TSG S +H G +S +++SL+ PRR
Sbjct: 46 TSGLSASASHSHRGRALSSRLLNSLLPHAPRR 77
>09_02_0077 + 3964729-3964734,3965194-3965289,3965744-3973579,
3973665-3973982,3974565-3974763,3974937-3975202,
3975288-3975574,3976714-3977818,3977900-3978046,
3978146-3978226,3978315-3978540,3978622-3978761,
3979539-3979645,3979739-3979841
Length = 3638
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 162 TASSMVSSLMDRCPRRRRWAAGMTPSIHSLV 254
T S +S+L+ P RRR + +TP+ SLV
Sbjct: 952 TMRSFLSTLVKGLPARRRADSSLTPASRSLV 982
>08_02_1414 +
26901937-26902597,26903361-26903397,26903733-26903791,
26904198-26904388,26904591-26904680,26904833-26904926,
26905008-26905159,26905250-26905347,26905400-26905459,
26905460-26905598,26905686-26905784,26905883-26906018,
26906352-26906413
Length = 625
Score = 26.6 bits (56), Expect = 2.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 143 NACWELYCLEHGI 181
N CW+L C+EH +
Sbjct: 467 NLCWKLICMEHAV 479
>08_01_1036 +
10520727-10521117,10521301-10521479,10521603-10522593,
10522613-10522656
Length = 534
Score = 26.6 bits (56), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 30 PRHTRSILRQPFVNYLQHIP 89
P+ TRS+ RQP+ + + +P
Sbjct: 368 PKETRSLYRQPYPEWFERVP 387
>06_03_0091 -
16515330-16515548,16515669-16515779,16517483-16517524,
16518067-16518181,16518820-16518914,16519916-16520015,
16521169-16521264,16522276-16522349,16524581-16524629,
16525414-16525483,16525553-16525652,16525721-16525779,
16526633-16526684,16527199-16527405
Length = 462
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 191 GQMPTEKTLGGGDDSFNTFF 250
GQMP+ LGG FNT+F
Sbjct: 240 GQMPSTSRLGGKYHIFNTYF 259
>05_03_0370 +
13144612-13144639,13144749-13145260,13146995-13147327,
13147690-13147699,13149704-13149816,13151187-13151258,
13151397-13151432,13151552-13151597,13151726-13151828,
13151916-13151973,13152231-13152281
Length = 453
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 123 KPEFRSATHAGSCTASSMVSSLMDRCPRRRRWAAGM 230
+P F A AG C A + + L+ P R+R G+
Sbjct: 5 RPVFGRAAKAGGCVAQCVEAGLLSPDPHRQRPEGGV 40
>04_04_0900 + 29232365-29232931
Length = 188
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 120 GKPEFRSATHAGSCTASSMVSSLMDRCPRRRRW 218
G+P R+ A + A+ MV+ + RRRRW
Sbjct: 144 GRPAARAEVEAAAERAAEMVAERAEERLRRRRW 176
>02_04_0150 - 20215070-20217577
Length = 835
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 119 GQAGVQIGNACWELYCLEHGIQPDGQMPTEKTLGGGDDSFNTFF 250
G+A V + C L E G+ PD TEK +FF
Sbjct: 673 GEAAVTLSRYCAYLVSYEPGLLPDDPEWTEKAYNDVKSGLGSFF 716
>01_04_0051 + 15430980-15431591
Length = 203
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 203 WASVHQAGYHARGSTAPSMRCRSEL 129
WA+ Q + RGST PS RCR +
Sbjct: 136 WAAAAQRPW-PRGSTTPSWRCRRRM 159
>12_02_0044 -
12807372-12807555,12807782-12807840,12807943-12808072,
12808160-12808224,12808318-12808506,12808574-12809119,
12809258-12809497,12809598-12810032
Length = 615
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +2
Query: 32 TP-HALHITTAFCKLSSTYT 88
TP H LH+ T C LSS YT
Sbjct: 354 TPCHTLHLETYACALSSVYT 373
>01_06_1634 + 38789097-38789936
Length = 279
Score = 26.2 bits (55), Expect = 3.6
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3
Query: 189 MDRCPRRRRW 218
+D CPRRRRW
Sbjct: 209 LDNCPRRRRW 218
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 219 PSVFSVGICPSGWIPCSRQYSSQ 151
P S I SGW+PCSR S+
Sbjct: 184 PVTLSAVIGLSGWLPCSRTLKSK 206
>04_01_0253 - 3358090-3359052
Length = 320
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 114 TSGKPEFRSATHAGSCTASSMVSSLMDRCPRRRR 215
T+G E GSCT + + RC RRRR
Sbjct: 37 TTGAGEEAMRAAGGSCTETGTTRTTPLRCRRRRR 70
>04_01_0211 +
2649405-2649950,2650100-2650285,2650367-2650583,
2650705-2650781,2650884-2650892
Length = 344
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 108 EMHSLILVYVEDNLQKAVVIW 46
EM+ L L V D +Q+ ++IW
Sbjct: 184 EMYDLFLRLVRDEIQQQIIIW 204
>11_06_0594 + 25349612-25352530
Length = 972
Score = 25.4 bits (53), Expect = 6.3
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 5 EGALHCEPATPHALHITTAFCKLSSTYTKMR 97
E +LHC + P A+ +TT+ +++ ++ R
Sbjct: 316 EASLHCGNSAPSAILVTTSLPEVAQSFCPYR 346
>11_01_0482 - 3714442-3715593
Length = 383
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 243 VLKESSPPPSVFSVGICPSGW 181
+L E+ PPP+ + G CP GW
Sbjct: 1 MLMETLPPPAAAAAGGCP-GW 20
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 247 ECIEGVIPAAQRLLRGHLSIRLDTMLEAVQLPACVADL 134
+CIEGV + +LR L R+ +L ++ C +L
Sbjct: 130 DCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLEL 167
>03_05_0823 -
27970038-27970258,27970279-27970544,27970608-27970657,
27971272-27971538,27971633-27972001,27972373-27973278
Length = 692
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = +2
Query: 20 CEPATPHALHITTAFCKLSSTYTKMRECISVHIGQAGVQIGNACWELYCLEHGI 181
C P A + CKL ++ IS HI G C + ++ GI
Sbjct: 590 CNPICAEAAIYSLPHCKLGDLTENVKNPISGHIWLDSEGTGRGCTVTFVIQLGI 643
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 247 ECIEGVIPAAQRLLRGHLSIRLDTMLEAVQLPACVADL 134
+CIEGV + +LR L R+ +L ++ C +L
Sbjct: 130 DCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLEL 167
>01_06_0143 - 26916490-26917719
Length = 409
Score = 25.4 bits (53), Expect = 6.3
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 198 CPRRRRWAAGMTPSIHSLV 254
CP RR W+ G+ P + +++
Sbjct: 3 CPSRRAWSDGLPPELLAII 21
>11_04_0435 + 17710853-17711003,17711312-17711547,17712417-17712752
Length = 240
Score = 25.0 bits (52), Expect = 8.3
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -3
Query: 252 LKNVLKESSPPPSVFSVGICPSGWIPCSRQYSSQHALPI*TPACPMCTEMHSLILVYVED 73
L+NVL + P V +V W+ C + Q ALP+ TP P +I+
Sbjct: 138 LRNVLAVT---PLVETVVEPDGSWLICRIYRTRQRALPVITP--PAIENAREIIIPPANG 192
Query: 72 NLQKAVV 52
N ++A V
Sbjct: 193 NAREAQV 199
>10_01_0265 + 2808271-2809064,2809624-2809807
Length = 325
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 138 SATH-AGSCTASSMVSSLMDRCPRRRRWAAGMTPSI 242
SAT +G C A+ V+ L CP R A+ P++
Sbjct: 156 SATSGSGKCAATGCVAELNGACPADLRVASASGPAV 191
>08_01_0999 +
10145782-10146392,10147665-10147734,10149409-10149643,
10149726-10149799,10149881-10149955
Length = 354
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 219 PSVFSVGICPSGWIPCSRQYSSQH--ALPI*TPACPMCTEMHSLIL 88
P FS+ + W+PCS SS A + PA P + H +L
Sbjct: 11 PHPFSIDLIR--WLPCSSSSSSDRLLAAAVHDPAAPSSSSSHLHLL 54
>06_03_1507 -
30646168-30646254,30646350-30646490,30648109-30648202,
30648445-30648509,30648934-30649176,30649442-30649499,
30649957-30650037,30650323-30650533,30650975-30651141,
30651216-30651268,30651600-30651681,30651765-30651914,
30652027-30652111,30652189-30652393,30652502-30652573,
30652911-30653456
Length = 779
Score = 25.0 bits (52), Expect = 8.3
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 24 NPPRHTRSILRQPFVNYLQHIPK*G-NASQYTSGKPEFRSATHAGSCTASSMVSSLMD 194
+P R TRS+L P L H PK ++T R++ + S ++S +S M+
Sbjct: 87 SPRRITRSMLLNPSAPLLHHHPKLQLQPRRFTRSLLSSRTSNSSSSSPSASTSTSKME 144
>06_03_0202 - 17860937-17861542
Length = 201
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 23 EPATPHALHITTAFCKLSSTYTKMRECISVHI 118
+ A PH L +T+ L S + R C++ ++
Sbjct: 25 QDAPPHPLQVTSPDSSLPSPSPRQRRCVAAYM 56
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 167 LEHGIQPDGQMPTEK 211
L G+QP G MP+EK
Sbjct: 694 LSAGVQPSGSMPSEK 708
>01_01_1104 + 8747053-8747478
Length = 141
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 88 QNEGMHLSTHRASRSSDRQRMLGAVLPRAWYP 183
QN HL+ HR S R R+L W P
Sbjct: 106 QNASWHLAPHRRRCSLTRPRLLVVPPSERWLP 137
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,199,575
Number of Sequences: 37544
Number of extensions: 197989
Number of successful extensions: 759
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -