Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0021_L07
         (77 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   0.77 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   0.77 
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    20   3.1  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   7.2  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 0.77
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   FRHEDFLYTRFFFVNYYFL 57
           +R E++LY+    +N Y+L
Sbjct: 254 YRGEEYLYSHKLLLNRYYL 272


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 0.77
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 1   FRHEDFLYTRFFFVNYYFL 57
           +R E++LY+    +N Y+L
Sbjct: 254 YRGEEYLYSHKLLLNRYYL 272


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -1

Query: 44  FTKKNLVYKKSSCR 3
           +TK++++YK +S R
Sbjct: 153 YTKRDVIYKWNSAR 166


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 31 FFFVNYYFLVFIY 69
          FFF+    L+F+Y
Sbjct: 7  FFFILVITLIFLY 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,194
Number of Sequences: 438
Number of extensions: 167
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 7
effective length of database: 143,277
effective search space used:  2578986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)