Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0021_L06
(247 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000146-1|AAH00146.1| 692|Homo sapiens protein arginine methyl... 87 1e-17
AK022739-1|BAB14215.1| 613|Homo sapiens protein ( Homo sapiens ... 87 1e-17
AK001502-1|BAA91726.1| 692|Homo sapiens protein ( Homo sapiens ... 87 1e-17
AB067520-1|BAB67826.1| 500|Homo sapiens KIAA1933 protein protein. 87 1e-17
Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein. 28 4.8
U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein. 28 4.8
U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein prot... 28 4.8
U50822-1|AAA93480.1| 356|Homo sapiens NEUROD protein. 28 6.3
D82347-1|BAA11558.1| 356|Homo sapiens NeuroD protein. 28 6.3
BT019731-1|AAV38536.1| 356|Homo sapiens neurogenic differentiat... 28 6.3
BC009046-1|AAH09046.1| 356|Homo sapiens neurogenic differentiat... 28 6.3
AF045152-1|AAC83145.1| 356|Homo sapiens neurogenic differentiat... 28 6.3
AC013733-1|AAY24267.1| 356|Homo sapiens unknown protein. 28 6.3
AB018693-1|BAA76603.1| 356|Homo sapiens NeuroD protein. 28 6.3
AB009997-1|BAA87605.1| 356|Homo sapiens NeuroD protein. 28 6.3
BC005349-1|AAH05349.1| 212|Homo sapiens secretogranin V (7B2 pr... 27 8.4
>BC000146-1|AAH00146.1| 692|Homo sapiens protein arginine
methyltransferase 7 protein.
Length = 692
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 1 ARGVFMWWELNMDPEGKIPLSCAPWWCHPDTNISSERPQDTIPWRDHWMQAVYYLPQEVT 180
A+ V WW++ MDPEGKI + AP+W H D P++ + WRDHWMQ VY+LPQE
Sbjct: 275 AQVVLSWWDIEMDPEGKIKCTMAPFWAHSD-------PEE-MQWRDHWMQCVYFLPQEEP 326
Query: 181 VHKGNVASLISCQDEYSLWFYL 246
V +G+ L++ D+Y +W+ L
Sbjct: 327 VVQGSALYLVAHHDDYCVWYSL 348
>AK022739-1|BAB14215.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ12677 fis, clone NT2RM4002398. ).
Length = 613
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 1 ARGVFMWWELNMDPEGKIPLSCAPWWCHPDTNISSERPQDTIPWRDHWMQAVYYLPQEVT 180
A+ V WW++ MDPEGKI + AP+W H D P++ + WRDHWMQ VY+LPQE
Sbjct: 196 AQVVLSWWDIEMDPEGKIKCTMAPFWAHSD-------PEE-MQWRDHWMQCVYFLPQEEP 247
Query: 181 VHKGNVASLISCQDEYSLWFYL 246
V +G+ L++ D+Y +W+ L
Sbjct: 248 VVQGSALYLVAHHDDYCVWYSL 269
>AK001502-1|BAA91726.1| 692|Homo sapiens protein ( Homo sapiens
cDNA FLJ10640 fis, clone NT2RP2005723, weakly similar to
HNRNP ARGININE N-METHYLTRANSFERASE (EC 2.1.1.-). ).
Length = 692
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 1 ARGVFMWWELNMDPEGKIPLSCAPWWCHPDTNISSERPQDTIPWRDHWMQAVYYLPQEVT 180
A+ V WW++ MDPEGKI + AP+W H D P++ + WRDHWMQ VY+LPQE
Sbjct: 275 AQVVLSWWDIEMDPEGKIKCTMAPFWAHSD-------PEE-MQWRDHWMQCVYFLPQEEP 326
Query: 181 VHKGNVASLISCQDEYSLWFYL 246
V +G+ L++ D+Y +W+ L
Sbjct: 327 VVQGSALYLVAHHDDYCVWYSL 348
>AB067520-1|BAB67826.1| 500|Homo sapiens KIAA1933 protein protein.
Length = 500
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +1
Query: 1 ARGVFMWWELNMDPEGKIPLSCAPWWCHPDTNISSERPQDTIPWRDHWMQAVYYLPQEVT 180
A+ V WW++ MDPEGKI + AP+W H D P++ + WRDHWMQ VY+LPQE
Sbjct: 157 AQVVLSWWDIEMDPEGKIKCTMAPFWAHSD-------PEE-MQWRDHWMQCVYFLPQEEP 208
Query: 181 VHKGNVASLISCQDEYSLWFYL 246
V +G+ L++ D+Y +W+ L
Sbjct: 209 VVQGSALYLVAHHDDYCVWYSL 230
>Y09077-1|CAA70298.1| 2644|Homo sapiens atr protein.
Length = 2644
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 132 ARSLDASCLLSTSRSDSTQRQCCF-INLMPRRI 227
A L SC +S S S Q +C F + L PRRI
Sbjct: 615 ANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRI 647
>U76308-1|AAC50929.1| 2644|Homo sapiens protein kinase ATR protein.
Length = 2644
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 132 ARSLDASCLLSTSRSDSTQRQCCF-INLMPRRI 227
A L SC +S S S Q +C F + L PRRI
Sbjct: 615 ANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRI 647
>U49844-1|AAC50405.1| 2644|Homo sapiens FRAP-related protein
protein.
Length = 2644
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 132 ARSLDASCLLSTSRSDSTQRQCCF-INLMPRRI 227
A L SC +S S S Q +C F + L PRRI
Sbjct: 615 ANLLTLSCRISDSYSPQAQSRCVFLLTLFPRRI 647
>U50822-1|AAA93480.1| 356|Homo sapiens NEUROD protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>D82347-1|BAA11558.1| 356|Homo sapiens NeuroD protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>BT019731-1|AAV38536.1| 356|Homo sapiens neurogenic differentiation
1 protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>BC009046-1|AAH09046.1| 356|Homo sapiens neurogenic differentiation
1 protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>AF045152-1|AAC83145.1| 356|Homo sapiens neurogenic differentiation
factor 1 protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>AC013733-1|AAY24267.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>AB018693-1|BAA76603.1| 356|Homo sapiens NeuroD protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>AB009997-1|BAA87605.1| 356|Homo sapiens NeuroD protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 81 TPPWGTTKRNFTFRVHIKLPPHEY 10
+PP+GT + F H+K PPH Y
Sbjct: 228 SPPYGTMDSSHVF--HVKPPPHAY 249
>BC005349-1|AAH05349.1| 212|Homo sapiens secretogranin V (7B2
protein) protein.
Length = 212
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/29 (34%), Positives = 13/29 (44%)
Frame = -2
Query: 93 CVRMTPPWGTTKRNFTFRVHIKLPPHEYP 7
C+ TP R F H+ P H+YP
Sbjct: 130 CLENTPDTAEFSREFQLHQHLSDPEHDYP 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,751,902
Number of Sequences: 237096
Number of extensions: 900251
Number of successful extensions: 1673
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1669
length of database: 76,859,062
effective HSP length: 59
effective length of database: 62,870,398
effective search space used: 1383148756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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